Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150398667

Identifier: 150398667

GI number: 150398667

Start: 3688834

End: 3689454

Strand: Reverse

Name: 150398667

Synonym: Smed_3481

Alternate gene names: NA

Gene position: 3689454-3688834 (Counterclockwise)

Preceding gene: 150398668

Following gene: 150398663

Centisome position: 97.56

GC content: 62.16

Gene sequence:

>621_bases
ATGTCGTCTTTGACCGGGGTTAAGGCAAGTTTCGCGGCCTTGTGCGCGCTTTTCATTTCAACGAACACGGCAATTCCCGC
ACAGGCGGGAGCCACTCCCTGGATGCAGACCGGGGCGGTGACGTCGCAGCCGATCGGCCATTACGAGTTCTGTCAAAAGT
ACAGGGGCGAATGCAGCGTCCGTTCGAAGTCGACGGTGGCGCCGCGCGTCACTGCGCGCGGCTGGGCCGCCATTCGCCAG
GTCAATGCCTCGGTCAACCGGCAGATCGCGCCTGTAACCGATATCGAGCTTAACGGCCGGGACGAGGTTTGGTCCTATCC
GAAGGCGCAGGGCGATTGCGAGGACTTCGCGCTGGAGAAGCGCAGACGCCTCATGCAGAAGGGCTTTTCCGCCGGCAACC
TGCTGATGACCGTGGTGCGCAAGCCTGACGGCGAGGGTCATGCGGTACTCACCGTCCGCACGGCTCAAGGCGACTTCGTT
CTCGACAATCTCGACAACAGCGTGAGATTGTGGACACACACGCCCTACCGCTTCCTCAAGCGCCAGGCCACGAACCATAG
CGGTCGCTGGGTCACCATCGACAATGGCGGCGAAGTGCTCGTCGGCTCCGTCGGAAACTGA

Upstream 100 bases:

>100_bases
AGAGCAGCGCAGGGGAAATTCCTAGAAAAGCTGTCGACAACTTTGGATTGCGCGAGTTGGTCCGGAAGGAACGGATGCGG
CCGCGTTGCAGGGGATTTGT

Downstream 100 bases:

>100_bases
CCCGCCGAACGATTTCCTCCTCAAAGGCCGCGAGATGCGGCCTTTTTTGTTGCGTGTCAGCGACCGCAAGCGGCAGCCCC
GATCTTCCAATTTCCGTGCT

Product: transglutaminase family protein cysteine peptidase BTLCP

Products: NA

Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSSLTGVKASFAALCALFISTNTAIPAQAGATPWMQTGAVTSQPIGHYEFCQKYRGECSVRSKSTVAPRVTARGWAAIRQ
VNASVNRQIAPVTDIELNGRDEVWSYPKAQGDCEDFALEKRRRLMQKGFSAGNLLMTVVRKPDGEGHAVLTVRTAQGDFV
LDNLDNSVRLWTHTPYRFLKRQATNHSGRWVTIDNGGEVLVGSVGN

Sequences:

>Translated_206_residues
MSSLTGVKASFAALCALFISTNTAIPAQAGATPWMQTGAVTSQPIGHYEFCQKYRGECSVRSKSTVAPRVTARGWAAIRQ
VNASVNRQIAPVTDIELNGRDEVWSYPKAQGDCEDFALEKRRRLMQKGFSAGNLLMTVVRKPDGEGHAVLTVRTAQGDFV
LDNLDNSVRLWTHTPYRFLKRQATNHSGRWVTIDNGGEVLVGSVGN
>Mature_205_residues
SSLTGVKASFAALCALFISTNTAIPAQAGATPWMQTGAVTSQPIGHYEFCQKYRGECSVRSKSTVAPRVTARGWAAIRQV
NASVNRQIAPVTDIELNGRDEVWSYPKAQGDCEDFALEKRRRLMQKGFSAGNLLMTVVRKPDGEGHAVLTVRTAQGDFVL
DNLDNSVRLWTHTPYRFLKRQATNHSGRWVTIDNGGEVLVGSVGN

Specific function: Unknown

COG id: COG3672

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22527; Mature: 22396

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLTGVKASFAALCALFISTNTAIPAQAGATPWMQTGAVTSQPIGHYEFCQKYRGECSV
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
RSKSTVAPRVTARGWAAIRQVNASVNRQIAPVTDIELNGRDEVWSYPKAQGDCEDFALEK
CCCCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEEECCCHHHCCCCCCCCCHHHHHHHH
RRRLMQKGFSAGNLLMTVVRKPDGEGHAVLTVRTAQGDFVLDNLDNSVRLWTHTPYRFLK
HHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCHHHHHH
RQATNHSGRWVTIDNGGEVLVGSVGN
HHCCCCCCCEEEECCCCCEEEECCCC
>Mature Secondary Structure 
SSLTGVKASFAALCALFISTNTAIPAQAGATPWMQTGAVTSQPIGHYEFCQKYRGECSV
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
RSKSTVAPRVTARGWAAIRQVNASVNRQIAPVTDIELNGRDEVWSYPKAQGDCEDFALEK
CCCCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEEECCCHHHCCCCCCCCCHHHHHHHH
RRRLMQKGFSAGNLLMTVVRKPDGEGHAVLTVRTAQGDFVLDNLDNSVRLWTHTPYRFLK
HHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCHHHHHH
RQATNHSGRWVTIDNGGEVLVGSVGN
HHCCCCCCCEEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA