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The map label for this gene is yjeK [C]

Identifier: 150398662

GI number: 150398662

Start: 3683187

End: 3684239

Strand: Reverse

Name: yjeK [C]

Synonym: Smed_3476

Alternate gene names: 150398662

Gene position: 3684239-3683187 (Counterclockwise)

Preceding gene: 150398663

Following gene: 150398660

Centisome position: 97.42

GC content: 65.91

Gene sequence:

>1053_bases
ATGACCGCGGAGCGCACGATCCGGACGCCGCGTGATCTCGTCGAAGCGGGCCTCATCGGCCGAGAGCGGGAGGAGGCGAT
TTCACGCGTTACGGCAAGCTATGCCGTCGCCATCAGCCCGGCGATTTCGCGCCTTGTCGACCGTGACGATCCGGACGACC
CGATTGCGCGGCAGTTCGTTCCCGATATGGCCGAACTCGCCGTCATGCCGGAAGAGCGCGCCGATCCGATCGGAGACAGC
ACGCATAGCCCCGTCACAGGGATCGTCCACCGCTATCCCGACCGCGTGTTGTTGAAGGCGGTCCATGTCTGCCCGGTTTA
CTGCCGCTTCTGTTTCCGTCGAGAAATGGTCGGCCCCGAGGGGCTCGGCACGCTCACGCCCGCGGAGCTCGACAGGGCGA
TCGCCTATATCTCCGGCCACCAGGAGATCTGGGAGGTGATCCTGACAGGAGGCGATCCGCTGGTGCTCTCGCCCCGTCGG
CTCGGCGAGATCATGGAGCGGCTTGCAAAGATCGAGCACGTCAAGGTCGTGCGCTTCCACACGCGCGTGCCGGTCGTCGA
GCCGGATCGCGTCGACGCGCCGCTGATCGCTGCGCTGAAAGGAAGCGGCAAGGCAACCTATGTGGCGCTGCACGCCAACC
ATCCGCGGGAACTGACCGTTGCGGCCCGCGCCGCCGCCGCGCGGCTGATCGATGCGGGCATCGTCATGGTGAGCCAGTCC
GTGCTGCTCAAAGGCGTCAATGACGATCCGGACATACTCGCCGAACTGATGCGCGCCTTCGTCGAGACACGCGTCAAGCC
CTATTACCTGCACCATCCCGATCTCGCGCCCGGCACCAGCCATTTTCGGTTGTCGATCGAAGAGGGCCAGGCCCTCGTCG
CCTCGTTGCGCGGCCGCGTATCCGGTCTGTGCCAGCCGGCCTACATCCTCGACATCCCCGGCGGCCACGGCAAGTCCGTC
GTCAGCGCAAGCAGCATCGAGGCGGAAGGGGGCGGCTGTTACACCGTCACCGACTTTCGCGGAAACCGGCACGCCTACCC
GCCGAAAGGGTAA

Upstream 100 bases:

>100_bases
CGAGCGGCATTGCGCTTGGTTTCGATCGCCTGGTCATGCTCGCGACGGGGGCTTCCCGCATCGACCAGGTCCTCTGGGCT
CCGGTCGCGGAGGTCACGCC

Downstream 100 bases:

>100_bases
CGCAGAAAACGCCCTGCACCTTCGAGATAACAGGGACACCACATCGTCCTGTCGTCGTCATCCTCGGGCTTGATCCGAGG
ATCCACACGCAAGCCTCACC

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTAERTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMAELAVMPEERADPIGDS
THSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGTLTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRR
LGEIMERLAKIEHVKVVRFHTRVPVVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQS
VLLKGVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLCQPAYILDIPGGHGKSV
VSASSIEAEGGGCYTVTDFRGNRHAYPPKG

Sequences:

>Translated_350_residues
MTAERTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMAELAVMPEERADPIGDS
THSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGTLTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRR
LGEIMERLAKIEHVKVVRFHTRVPVVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQS
VLLKGVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLCQPAYILDIPGGHGKSV
VSASSIEAEGGGCYTVTDFRGNRHAYPPKG
>Mature_349_residues
TAERTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMAELAVMPEERADPIGDST
HSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGTLTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRL
GEIMERLAKIEHVKVVRFHTRVPVVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSV
LLKGVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLCQPAYILDIPGGHGKSVV
SASSIEAEGGGCYTVTDFRGNRHAYPPKG

Specific function: Unknown

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=286, Percent_Identity=33.5664335664336, Blast_Score=174, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38126; Mature: 37995

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAERTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFV
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHC
PDMAELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPE
CCHHHHHCCCHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLGTLTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFH
CCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHEEEEEEE
TRVPVVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQS
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VLLKGVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRV
HHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHH
SGLCQPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG
HCCCCCEEEEECCCCCCCCEEECCCEECCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TAERTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFV
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHC
PDMAELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPE
CCHHHHHCCCHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLGTLTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFH
CCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHEEEEEEE
TRVPVVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQS
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VLLKGVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRV
HHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHH
SGLCQPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG
HCCCCCEEEEECCCCCCCCEEECCCEECCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]