| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cya1 [H]
Identifier: 150398648
GI number: 150398648
Start: 3670822
End: 3672777
Strand: Reverse
Name: cya1 [H]
Synonym: Smed_3462
Alternate gene names: 150398648
Gene position: 3672777-3670822 (Counterclockwise)
Preceding gene: 150398649
Following gene: 150398647
Centisome position: 97.11
GC content: 63.65
Gene sequence:
>1956_bases ATGCACATTGCCGACGGGGACAAGCCTTCTGGGACCTGGACCAGCTCACTGCGATCGCTGCTCGGTCTCGTGATGGTTGC GATGCTCATCGTCGTGTCCGCGACGCTGGTGGGGCTTGACTATCGCCGCGCGCGCGTTGCCGCCATCGCAGGCGCCGAAG ACAATATGAGCGCCTTCGTCGGCCGTCTGGTCGATCGCCTGGGGATGCTTTCCGGCGATACCTCCGCACTTGTCAACCTC GTCGCATCGGTCGCCAATTCCTTTCTGGTCCCGCCGCCGGAGCGGATGCATGACAAAGTAGCGGTCCTGCGCGAAGGCAT CGCCCGCTCGCCGCATATCGACGGCGTCTATGTCGGTTATCCGAGCGGCGCATTTTTTCATGTGGTTGATCTGGACTCGG CCGCCTGGCGCATGGCGCTGGACGCGCCGCGGGGCGCGGCCATCGCTGTGCGTTCGATGGAACGGGACGACCAGGGCAAG CCCTTCGACCGGATCCTGTTCCTGGACGCGAGCGGTTTGCAGTTCGCCGAACGCCGCGCTGCTTCGAACGGATTCGATCC CAGAACGCGGCCCTGGTACCGCGCCGCCGTCAACGGCCAGGCGCCGGTGGCGATAGGCCCCTATGAGATGGCCACGACAC GCAATCTGGGGATGACGATATCGCAGGCTCACAGCGGCAATCCCAAGATCGTTATCGGCGCCGATGTCGTGCTCGACACG ATCACCGATTTTCTGTCCCGCGAGCGGCTGACCGACGACTCGGTTTCGTTCGTTCTCGACGCGGTCGGACGGCCGATCAT CCACTCCGACACCGTAATGATGCGGCGCATCATGGCATCGAAAGGGCGGGACCAACCGGTGGTCACGCCGCAGGAAGACG GGCTGATCGAGAGGATTCGGCGCAACCCGCCACCGGCCGGAAAGGCAACCCTCGTCGAGGTCGGAGATCGCACCTATCTC GTGACCGTGGCACCGCTCGAATCGGCATTGCTCCTATCCGGACACAGGGTCGTCGTCGCCGCCCCGCTCGACGAACTGCT GGCGGCGGCCAACGAAACCCTTGTTCAGGGACTTGCCGTCTCCGGAGCCGTGGTGGTGGTGGCCGTTCTCCTGGCGCTCG TGCTTGCGCATCTGATCACGAAATCGCTCAACCAGCTCACCGACAGCGCCAACCGCCTTCAAGACCTGGATTTTTCCACG CCCATCGAGGTTTCCTCGCATGTGGCCGAAATCTCGATGCTCAACGGCGCGATGAACAAGGCCCGTGACGCGATCTTCAC CTTTGCGCTCTATGTGCCGAAGGAACTGGTGCGCAAGGGCATCGAATCCGGCCACTTCGGCGGCCGCGCCGCCTGGCGGC AGGAAGTGACGGCGCTGTTCACCGACATCTACGACTTCACCACCATCAGCGAAGGACGCTCGCCGGAAGAAGTGGTGGCG ATGCTCTCGGAATATTTTGACCTTTTCAGCGAGATCGTCGACGCGCATGACGGAACCATCATCCAGTTCCATGGAGACTC GGTCTTCGCCATGTGGAACGCGCCGGTCGCCGATGTCAGACATGCCGAGAATGCCTGTCGTTGCGCACTCGCCGTCGAGG AGAGGCTTCGGGCCTTCAACGCTGCGCAACGCGCCAGGGGATTGCCGGAATTCCGCACCCGCTTCGGTATCCACACCGGC ACGGCCGTCGTCGGCAGCGTCGGTGCCAAGGAACGGCTGCAATACACCGCCATGGGCGATACCGTGAACGTCGCCTCGCG GCTCGAGGGCATGAACAAGGATTATGGCACGACAGTTCTGGCAAGCGGTGCGGTGGTGGCGCAATGCAAGGACATGGTGA AATTCCGCCCGCTCGGCACCGCCAGGGCCAAGGGCCGCTCGACGGCGCTCGACATTTACGAAGTCGTGGGCGTGGCCCGC GCGGTGGATACTGCCGAGACAGGAACGGCCGCCTGA
Upstream 100 bases:
>100_bases TTCATGATTTTAGGTCCATCCGACTAAAATCGTCGTGATCTATGCAAATCCGGAGCAATATTGCAAAACTCCGGAATCGG GATGCAAGGACATCGAAAGC
Downstream 100 bases:
>100_bases CCGAGATCTCAGAAGATGCTGCACGAATTGCAGGGCCGCTGAGATCGCTTCGGCGCCTGAAAACAAGAAAAGCCCGGAAA TCCGGGCTTTTCTTGTTATC
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1 [H]
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MHIADGDKPSGTWTSSLRSLLGLVMVAMLIVVSATLVGLDYRRARVAAIAGAEDNMSAFVGRLVDRLGMLSGDTSALVNL VASVANSFLVPPPERMHDKVAVLREGIARSPHIDGVYVGYPSGAFFHVVDLDSAAWRMALDAPRGAAIAVRSMERDDQGK PFDRILFLDASGLQFAERRAASNGFDPRTRPWYRAAVNGQAPVAIGPYEMATTRNLGMTISQAHSGNPKIVIGADVVLDT ITDFLSRERLTDDSVSFVLDAVGRPIIHSDTVMMRRIMASKGRDQPVVTPQEDGLIERIRRNPPPAGKATLVEVGDRTYL VTVAPLESALLLSGHRVVVAAPLDELLAAANETLVQGLAVSGAVVVVAVLLALVLAHLITKSLNQLTDSANRLQDLDFST PIEVSSHVAEISMLNGAMNKARDAIFTFALYVPKELVRKGIESGHFGGRAAWRQEVTALFTDIYDFTTISEGRSPEEVVA MLSEYFDLFSEIVDAHDGTIIQFHGDSVFAMWNAPVADVRHAENACRCALAVEERLRAFNAAQRARGLPEFRTRFGIHTG TAVVGSVGAKERLQYTAMGDTVNVASRLEGMNKDYGTTVLASGAVVAQCKDMVKFRPLGTARAKGRSTALDIYEVVGVAR AVDTAETGTAA
Sequences:
>Translated_651_residues MHIADGDKPSGTWTSSLRSLLGLVMVAMLIVVSATLVGLDYRRARVAAIAGAEDNMSAFVGRLVDRLGMLSGDTSALVNL VASVANSFLVPPPERMHDKVAVLREGIARSPHIDGVYVGYPSGAFFHVVDLDSAAWRMALDAPRGAAIAVRSMERDDQGK PFDRILFLDASGLQFAERRAASNGFDPRTRPWYRAAVNGQAPVAIGPYEMATTRNLGMTISQAHSGNPKIVIGADVVLDT ITDFLSRERLTDDSVSFVLDAVGRPIIHSDTVMMRRIMASKGRDQPVVTPQEDGLIERIRRNPPPAGKATLVEVGDRTYL VTVAPLESALLLSGHRVVVAAPLDELLAAANETLVQGLAVSGAVVVVAVLLALVLAHLITKSLNQLTDSANRLQDLDFST PIEVSSHVAEISMLNGAMNKARDAIFTFALYVPKELVRKGIESGHFGGRAAWRQEVTALFTDIYDFTTISEGRSPEEVVA MLSEYFDLFSEIVDAHDGTIIQFHGDSVFAMWNAPVADVRHAENACRCALAVEERLRAFNAAQRARGLPEFRTRFGIHTG TAVVGSVGAKERLQYTAMGDTVNVASRLEGMNKDYGTTVLASGAVVAQCKDMVKFRPLGTARAKGRSTALDIYEVVGVAR AVDTAETGTAA >Mature_651_residues MHIADGDKPSGTWTSSLRSLLGLVMVAMLIVVSATLVGLDYRRARVAAIAGAEDNMSAFVGRLVDRLGMLSGDTSALVNL VASVANSFLVPPPERMHDKVAVLREGIARSPHIDGVYVGYPSGAFFHVVDLDSAAWRMALDAPRGAAIAVRSMERDDQGK PFDRILFLDASGLQFAERRAASNGFDPRTRPWYRAAVNGQAPVAIGPYEMATTRNLGMTISQAHSGNPKIVIGADVVLDT ITDFLSRERLTDDSVSFVLDAVGRPIIHSDTVMMRRIMASKGRDQPVVTPQEDGLIERIRRNPPPAGKATLVEVGDRTYL VTVAPLESALLLSGHRVVVAAPLDELLAAANETLVQGLAVSGAVVVVAVLLALVLAHLITKSLNQLTDSANRLQDLDFST PIEVSSHVAEISMLNGAMNKARDAIFTFALYVPKELVRKGIESGHFGGRAAWRQEVTALFTDIYDFTTISEGRSPEEVVA MLSEYFDLFSEIVDAHDGTIIQFHGDSVFAMWNAPVADVRHAENACRCALAVEERLRAFNAAQRARGLPEFRTRFGIHTG TAVVGSVGAKERLQYTAMGDTVNVASRLEGMNKDYGTTVLASGAVVAQCKDMVKFRPLGTARAKGRSTALDIYEVVGVAR AVDTAETGTAA
Specific function: Plays essential roles in regulation of cellular metabolism by catalyzing the synthesis of a second messenger, cAMP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
Organism=Homo sapiens, GI167830411, Length=135, Percent_Identity=37.7777777777778, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI4504217, Length=190, Percent_Identity=33.6842105263158, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI222080083, Length=179, Percent_Identity=34.0782122905028, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI4580422, Length=135, Percent_Identity=36.2962962962963, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI134152694, Length=177, Percent_Identity=32.2033898305085, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4557255, Length=137, Percent_Identity=30.6569343065693, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI24497587, Length=137, Percent_Identity=29.9270072992701, Blast_Score=71, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193206632, Length=134, Percent_Identity=35.8208955223881, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17534659, Length=137, Percent_Identity=36.4963503649635, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI212659371, Length=134, Percent_Identity=34.3283582089552, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71989805, Length=134, Percent_Identity=31.3432835820896, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71989822, Length=134, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI86564713, Length=173, Percent_Identity=28.9017341040462, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508769, Length=135, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17561804, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193207841, Length=143, Percent_Identity=30.0699300699301, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193206054, Length=149, Percent_Identity=32.8859060402685, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71985505, Length=138, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI62484298, Length=135, Percent_Identity=34.8148148148148, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI62484477, Length=135, Percent_Identity=34.8148148148148, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI116008008, Length=135, Percent_Identity=34.8148148148148, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI161078020, Length=141, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574512, Length=135, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076872, Length=135, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI62473752, Length=140, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI17137448, Length=140, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI221330470, Length=176, Percent_Identity=27.8409090909091, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330468, Length=176, Percent_Identity=27.8409090909091, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI85725044, Length=143, Percent_Identity=34.965034965035, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI24647268, Length=138, Percent_Identity=36.9565217391304, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI281366459, Length=135, Percent_Identity=32.5925925925926, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI281366457, Length=135, Percent_Identity=32.5925925925926, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI281366455, Length=135, Percent_Identity=32.5925925925926, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI56292422, Length=135, Percent_Identity=32.5925925925926, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI56292424, Length=135, Percent_Identity=32.5925925925926, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI24666940, Length=135, Percent_Identity=32.5925925925926, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 69965; Mature: 69965
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIADGDKPSGTWTSSLRSLLGLVMVAMLIVVSATLVGLDYRRARVAAIAGAEDNMSAFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCHHHHH GRLVDRLGMLSGDTSALVNLVASVANSFLVPPPERMHDKVAVLREGIARSPHIDGVYVGY HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC PSGAFFHVVDLDSAAWRMALDAPRGAAIAVRSMERDDQGKPFDRILFLDASGLQFAERRA CCCCEEEEEECCCHHHHEEECCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHH ASNGFDPRTRPWYRAAVNGQAPVAIGPYEMATTRNLGMTISQAHSGNPKIVIGADVVLDT HCCCCCCCCCCCEEEECCCCCCEEECCCHHHCCCCCCCEEECCCCCCCCEEEEHHHHHHH ITDFLSRERLTDDSVSFVLDAVGRPIIHSDTVMMRRIMASKGRDQPVVTPQEDGLIERIR HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RNPPPAGKATLVEVGDRTYLVTVAPLESALLLSGHRVVVAAPLDELLAAANETLVQGLAV CCCCCCCCEEEEEECCCEEEEEECCCCCHHEECCCEEEEECCHHHHHHHHHHHHHHHHHH SGAVVVVAVLLALVLAHLITKSLNQLTDSANRLQDLDFSTPIEVSSHVAEISMLNGAMNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ARDAIFTFALYVPKELVRKGIESGHFGGRAAWRQEVTALFTDIYDFTTISEGRSPEEVVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH MLSEYFDLFSEIVDAHDGTIIQFHGDSVFAMWNAPVADVRHAENACRCALAVEERLRAFN HHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH AAQRARGLPEFRTRFGIHTGTAVVGSVGAKERLQYTAMGDTVNVASRLEGMNKDYGTTVL HHHHHCCCHHHHHHHCCCCCCHHHHCCCHHHHEEEEECCCHHHHHHHHCCCCCCCCCCHH ASGAVVAQCKDMVKFRPLGTARAKGRSTALDIYEVVGVARAVDTAETGTAA CCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHIADGDKPSGTWTSSLRSLLGLVMVAMLIVVSATLVGLDYRRARVAAIAGAEDNMSAFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCHHHHH GRLVDRLGMLSGDTSALVNLVASVANSFLVPPPERMHDKVAVLREGIARSPHIDGVYVGY HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC PSGAFFHVVDLDSAAWRMALDAPRGAAIAVRSMERDDQGKPFDRILFLDASGLQFAERRA CCCCEEEEEECCCHHHHEEECCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHH ASNGFDPRTRPWYRAAVNGQAPVAIGPYEMATTRNLGMTISQAHSGNPKIVIGADVVLDT HCCCCCCCCCCCEEEECCCCCCEEECCCHHHCCCCCCCEEECCCCCCCCEEEEHHHHHHH ITDFLSRERLTDDSVSFVLDAVGRPIIHSDTVMMRRIMASKGRDQPVVTPQEDGLIERIR HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RNPPPAGKATLVEVGDRTYLVTVAPLESALLLSGHRVVVAAPLDELLAAANETLVQGLAV CCCCCCCCEEEEEECCCEEEEEECCCCCHHEECCCEEEEECCHHHHHHHHHHHHHHHHHH SGAVVVVAVLLALVLAHLITKSLNQLTDSANRLQDLDFSTPIEVSSHVAEISMLNGAMNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ARDAIFTFALYVPKELVRKGIESGHFGGRAAWRQEVTALFTDIYDFTTISEGRSPEEVVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH MLSEYFDLFSEIVDAHDGTIIQFHGDSVFAMWNAPVADVRHAENACRCALAVEERLRAFN HHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH AAQRARGLPEFRTRFGIHTGTAVVGSVGAKERLQYTAMGDTVNVASRLEGMNKDYGTTVL HHHHHCCCHHHHHHHCCCCCCHHHHCCCHHHHEEEEECCCHHHHHHHHCCCCCCCCCCHH ASGAVVAQCKDMVKFRPLGTARAKGRSTALDIYEVVGVARAVDTAETGTAA CCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430; 1970565 [H]