| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ilvE [H]
Identifier: 150398611
GI number: 150398611
Start: 3630346
End: 3631443
Strand: Reverse
Name: ilvE [H]
Synonym: Smed_3425
Alternate gene names: 150398611
Gene position: 3631443-3630346 (Counterclockwise)
Preceding gene: 150398612
Following gene: 150398609
Centisome position: 96.02
GC content: 63.48
Gene sequence:
>1098_bases ATGACCGGTGCCGGTGAGCAGACTTTCCTGTTCGAGCAAAACGCGAACCCCTTGGCAACGAGCGAGCGCGAGGCTCTGCT TGCTAATCCCGGCTTCGGGCGCGTGTTCACCGACCATATGGTGACGATCCGCTATTGCGAAAGCCGCGGCTGGCACGATG CGAAGGTTGGCCCGAGAAAAGCCTTTGATCTCGATCCGTCCACACTCGTGCTGCACTACGCGCAGGAGATCTTCGAGGGC ATGAAGGCCTATGGGCTGCCCGGCGGCGGCGCCACGCTGTTTCGTCCCGATGCGAATGCGCGGCGTTTCCGCAACTCCGC ACTTCGGCTCGCAATGGCGCCCCTGCCGGAGGAGCTCTTCATCCGATCGGTACGCGAACTGGTGCGTGTCGACCGGGACT GGATACCGGCCGCTGAAGGAGCCGCACTCTATCTCCGGCCGTTCATGATTGCCACGGAGGTACTGCTTGGGGTGAAGCCT TCGGCCGAATACCTCTACTGCGTCATTGCTTCCTCTGTCGGTTCCTACTTCAAGGGTGGCGCTCCAGCGGTAACCATATG GGTTTCGGAGAACTTCACGCGGGCAGCGCCCGGCGGCACCGGAGAGGCAAAATGCGGCGGCAACTATGCCGCAAGCCTCG CGGCTCAGGCCGAGGCGATGCAGGAGGGCTGCGAACAGGTGGTGTTCCTGGACGCGGTGGAACGCCGCTTTGTCGAAGAA CTCGGCGGCATGAACGTCTTCTTCGTCTTCCGGGACGGCTCATTGCAGACGCCTCCGCTCACCGGCACCATTCTCCCGGG CATCACGCGCGATTCGCTGATCACGCTCGCCCGCGATATGGGGATGACGGTGCGTGAAGAACCCTATGCGATCGATCAGT GGCAGGCGGATGCGGAAAGCGGCCGTCTCACCGAAGCCTTTGCCTGCGGGACGGCGGCTGTTGTGACCCCGATCGGCAAG GTCAAGGGCCGCGAGCACAGCTTCACCATCGGTGACGGTGGTGCCGGTCCGGTCGCAAACCGCCTGAAGGCGGCACTGCT CGATATCCAGAACGGCCGCGCGCCGGACAGGCATGGCTGGCTCGACCGGCTGTTCTAA
Upstream 100 bases:
>100_bases AGGTCTTGTCTTCTCATCGTATAGGATGAAAGGAACGTCCAGCAGCAGAGATATATAATGCGGGCGCATCAATCGCTCGC AACGAAGGAGCAGACGACAG
Downstream 100 bases:
>100_bases CCGCCATAAGCGTGTCTGGTCAGCGGCCCCTCACATCAAGAGATAAGCCCATATCGACACGCTGACCACGCCGAGCGCGG TCGTCAGCGTAATGGTCGAG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTGAGEQTFLFEQNANPLATSEREALLANPGFGRVFTDHMVTIRYCESRGWHDAKVGPRKAFDLDPSTLVLHYAQEIFEG MKAYGLPGGGATLFRPDANARRFRNSALRLAMAPLPEELFIRSVRELVRVDRDWIPAAEGAALYLRPFMIATEVLLGVKP SAEYLYCVIASSVGSYFKGGAPAVTIWVSENFTRAAPGGTGEAKCGGNYAASLAAQAEAMQEGCEQVVFLDAVERRFVEE LGGMNVFFVFRDGSLQTPPLTGTILPGITRDSLITLARDMGMTVREEPYAIDQWQADAESGRLTEAFACGTAAVVTPIGK VKGREHSFTIGDGGAGPVANRLKAALLDIQNGRAPDRHGWLDRLF
Sequences:
>Translated_365_residues MTGAGEQTFLFEQNANPLATSEREALLANPGFGRVFTDHMVTIRYCESRGWHDAKVGPRKAFDLDPSTLVLHYAQEIFEG MKAYGLPGGGATLFRPDANARRFRNSALRLAMAPLPEELFIRSVRELVRVDRDWIPAAEGAALYLRPFMIATEVLLGVKP SAEYLYCVIASSVGSYFKGGAPAVTIWVSENFTRAAPGGTGEAKCGGNYAASLAAQAEAMQEGCEQVVFLDAVERRFVEE LGGMNVFFVFRDGSLQTPPLTGTILPGITRDSLITLARDMGMTVREEPYAIDQWQADAESGRLTEAFACGTAAVVTPIGK VKGREHSFTIGDGGAGPVANRLKAALLDIQNGRAPDRHGWLDRLF >Mature_364_residues TGAGEQTFLFEQNANPLATSEREALLANPGFGRVFTDHMVTIRYCESRGWHDAKVGPRKAFDLDPSTLVLHYAQEIFEGM KAYGLPGGGATLFRPDANARRFRNSALRLAMAPLPEELFIRSVRELVRVDRDWIPAAEGAALYLRPFMIATEVLLGVKPS AEYLYCVIASSVGSYFKGGAPAVTIWVSENFTRAAPGGTGEAKCGGNYAASLAAQAEAMQEGCEQVVFLDAVERRFVEEL GGMNVFFVFRDGSLQTPPLTGTILPGITRDSLITLARDMGMTVREEPYAIDQWQADAESGRLTEAFACGTAAVVTPIGKV KGREHSFTIGDGGAGPVANRLKAALLDIQNGRAPDRHGWLDRLF
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI38176287, Length=332, Percent_Identity=39.1566265060241, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI296010904, Length=332, Percent_Identity=39.1566265060241, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI296010906, Length=332, Percent_Identity=39.1566265060241, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI50658084, Length=338, Percent_Identity=37.2781065088757, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI296010902, Length=332, Percent_Identity=35.5421686746988, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI296010900, Length=332, Percent_Identity=35.5421686746988, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI258614015, Length=294, Percent_Identity=37.7551020408163, Blast_Score=180, Evalue=2e-45, Organism=Escherichia coli, GI48994963, Length=321, Percent_Identity=33.9563862928349, Blast_Score=147, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17568601, Length=296, Percent_Identity=39.527027027027, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17565728, Length=343, Percent_Identity=35.5685131195335, Blast_Score=191, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6322002, Length=354, Percent_Identity=39.5480225988701, Blast_Score=235, Evalue=9e-63, Organism=Saccharomyces cerevisiae, GI6322608, Length=345, Percent_Identity=37.6811594202899, Blast_Score=221, Evalue=1e-58, Organism=Drosophila melanogaster, GI24641779, Length=338, Percent_Identity=38.4615384615385, Blast_Score=222, Evalue=3e-58,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39584; Mature: 39453
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAGEQTFLFEQNANPLATSEREALLANPGFGRVFTDHMVTIRYCESRGWHDAKVGPRK CCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHEEEEEEECCCCCCCCCCCCCC AFDLDPSTLVLHYAQEIFEGMKAYGLPGGGATLFRPDANARRFRNSALRLAMAPLPEELF CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHEEECCCCHHHH IRSVRELVRVDRDWIPAAEGAALYLRPFMIATEVLLGVKPSAEYLYCVIASSVGSYFKGG HHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHEEEEEEHHHHHHHHCCC APAVTIWVSENFTRAAPGGTGEAKCGGNYAASLAAQAEAMQEGCEQVVFLDAVERRFVEE CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGMNVFFVFRDGSLQTPPLTGTILPGITRDSLITLARDMGMTVREEPYAIDQWQADAES HCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GRLTEAFACGTAAVVTPIGKVKGREHSFTIGDGGAGPVANRLKAALLDIQNGRAPDRHGW CCCHHHHHCCCHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCH LDRLF HHHCC >Mature Secondary Structure TGAGEQTFLFEQNANPLATSEREALLANPGFGRVFTDHMVTIRYCESRGWHDAKVGPRK CCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHEEEEEEECCCCCCCCCCCCCC AFDLDPSTLVLHYAQEIFEGMKAYGLPGGGATLFRPDANARRFRNSALRLAMAPLPEELF CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHEEECCCCHHHH IRSVRELVRVDRDWIPAAEGAALYLRPFMIATEVLLGVKPSAEYLYCVIASSVGSYFKGG HHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHEEEEEEHHHHHHHHCCC APAVTIWVSENFTRAAPGGTGEAKCGGNYAASLAAQAEAMQEGCEQVVFLDAVERRFVEE CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGMNVFFVFRDGSLQTPPLTGTILPGITRDSLITLARDMGMTVREEPYAIDQWQADAES HCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GRLTEAFACGTAAVVTPIGKVKGREHSFTIGDGGAGPVANRLKAALLDIQNGRAPDRHGW CCCHHHHHCCCHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCH LDRLF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]