| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hisB [H]
Identifier: 150398455
GI number: 150398455
Start: 3442201
End: 3442809
Strand: Reverse
Name: hisB [H]
Synonym: Smed_3263
Alternate gene names: 150398455
Gene position: 3442809-3442201 (Counterclockwise)
Preceding gene: 150398463
Following gene: 150398454
Centisome position: 91.03
GC content: 62.4
Gene sequence:
>609_bases ATGGCAGACGTGACGCCGAGCCGCACCGGCCAAGTTTCGCGAAAGACGAATGAAACGGCGGTATCCGTCGCCCTCGACGT GGAGGGCACGGGTTCCTCGAAGATCGTGACCGGCGTCGGCTTCTTCGACCATATGCTGGATCAGCTCTCGCGCCATTCGC TGATCGACATGGATATCAAGGCGGAGGGCGACCTCCATGTCGACGATCATCACACCGTCGAGGATACCGGCATCGCCATC GGCCAGGCGTTGGCCAAGGCGCTCGGCGATCGCCGCGGCATCACCCGTTATGCCTCGATCGACCTCGCAATGGACGAGAC GATGACGCGCGCCGCCGTCGATGTCTCGGGTCGGCCCTTCCTAGTCTGGAACGTGGCCTTCACCGCACCGAAGATCGGCA CATTCGACACCGAGCTTGTGCGCGAGTTTTTCCAGGCGCTCGCCCAGCATGCCGGCATCACGCTGCATGTGCAGAACATC TACGGCGCAAACAATCATCATATCGCCGAAACCTGCTTCAAGTCCGTCGCCCGCGTACTCCGCACGGCAACCGAAATCGA TCCGCGCCAGGCGGGACGCGTTCCCTCTACCAAGGGAACGCTCGCCTGA
Upstream 100 bases:
>100_bases AGGAAGGGTGGCGGTGTTCGCCCTTCTCCACCGTCCGAATGGATATTGCTCCGACAGCCAGGCCGGCCCAAAGTCATCGG AGCGCAGACAGGAGAGCCCG
Downstream 100 bases:
>100_bases GCCGGTCAGTATCTGGTTCAAAGACCATGGCCTCCTACCTGATCATGACCCCGCCCGGCGCACCGGCCGACGACGAAAGG GCGCGGTTCATCGCCGACGG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MADVTPSRTGQVSRKTNETAVSVALDVEGTGSSKIVTGVGFFDHMLDQLSRHSLIDMDIKAEGDLHVDDHHTVEDTGIAI GQALAKALGDRRGITRYASIDLAMDETMTRAAVDVSGRPFLVWNVAFTAPKIGTFDTELVREFFQALAQHAGITLHVQNI YGANNHHIAETCFKSVARVLRTATEIDPRQAGRVPSTKGTLA
Sequences:
>Translated_202_residues MADVTPSRTGQVSRKTNETAVSVALDVEGTGSSKIVTGVGFFDHMLDQLSRHSLIDMDIKAEGDLHVDDHHTVEDTGIAI GQALAKALGDRRGITRYASIDLAMDETMTRAAVDVSGRPFLVWNVAFTAPKIGTFDTELVREFFQALAQHAGITLHVQNI YGANNHHIAETCFKSVARVLRTATEIDPRQAGRVPSTKGTLA >Mature_201_residues ADVTPSRTGQVSRKTNETAVSVALDVEGTGSSKIVTGVGFFDHMLDQLSRHSLIDMDIKAEGDLHVDDHHTVEDTGIAIG QALAKALGDRRGITRYASIDLAMDETMTRAAVDVSGRPFLVWNVAFTAPKIGTFDTELVREFFQALAQHAGITLHVQNIY GANNHHIAETCFKSVARVLRTATEIDPRQAGRVPSTKGTLA
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=46.9072164948454, Blast_Score=186, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6324776, Length=214, Percent_Identity=38.3177570093458, Blast_Score=156, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21840; Mature: 21709
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVTPSRTGQVSRKTNETAVSVALDVEGTGSSKIVTGVGFFDHMLDQLSRHSLIDMDIK CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEE AEGDLHVDDHHTVEDTGIAIGQALAKALGDRRGITRYASIDLAMDETMTRAAVDVSGRPF CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHEECCCCCE LVWNVAFTAPKIGTFDTELVREFFQALAQHAGITLHVQNIYGANNHHIAETCFKSVARVL EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHH RTATEIDPRQAGRVPSTKGTLA HHHHHCCHHHCCCCCCCCCCCC >Mature Secondary Structure ADVTPSRTGQVSRKTNETAVSVALDVEGTGSSKIVTGVGFFDHMLDQLSRHSLIDMDIK CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEE AEGDLHVDDHHTVEDTGIAIGQALAKALGDRRGITRYASIDLAMDETMTRAAVDVSGRPF CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHEECCCCCE LVWNVAFTAPKIGTFDTELVREFFQALAQHAGITLHVQNIYGANNHHIAETCFKSVARVL EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHH RTATEIDPRQAGRVPSTKGTLA HHHHHCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]