| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398454
Identifier: 150398454
GI number: 150398454
Start: 3441698
End: 3442174
Strand: Reverse
Name: 150398454
Synonym: Smed_3262
Alternate gene names: NA
Gene position: 3442174-3441698 (Counterclockwise)
Preceding gene: 150398455
Following gene: 150398453
Centisome position: 91.02
GC content: 63.31
Gene sequence:
>477_bases ATGGCCTCCTACCTGATCATGACCCCGCCCGGCGCACCGGCCGACGACGAAAGGGCGCGGTTCATCGCCGACGGCTTCTC CTGGACTGCCTTCTTCTTTCCCGGTCCGTGGCTCATCGTCAAAGGCGCGTGGCTCGTCGGAATCCCCGTCGCCACTTTGC AGATCCTGCTGCTTCTCGCCGCATCGATGCCGGGCGGCTTCGGCGCGGCCCTGCTCATTCATCTGGCGCTCGGTCTCATC GTGTCGCTGGAAGGGCCGCTTCTCGTTGCCAGACACCTGTCGACACGCGACTGGACGCTTCGTTCGGTCGTTCCGGCTCG CGATATCGCAGCGGCCGAGGAAATCTACTATTCGAATTCGGATCCGACCGTGCATGAAAGCCATGCGAAGCCATTGCCGT CGATCGATCGGTCCGGCACGGGACGCCTGGGCGACACAGCCGGGCTCGGCTTCTTTCAATCCTATGGAGAACGCTGA
Upstream 100 bases:
>100_bases TACTCCGCACGGCAACCGAAATCGATCCGCGCCAGGCGGGACGCGTTCCCTCTACCAAGGGAACGCTCGCCTGAGCCGGT CAGTATCTGGTTCAAAGACC
Downstream 100 bases:
>100_bases TGCGGGTCGCCATCATCGATTATGGATCGGGCAATCTGCGCTCGGCCACCAAGGCCTTCGAACGCGCCGCCCGCGAAGCC GGCATCTCAGCAGAAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MASYLIMTPPGAPADDERARFIADGFSWTAFFFPGPWLIVKGAWLVGIPVATLQILLLLAASMPGGFGAALLIHLALGLI VSLEGPLLVARHLSTRDWTLRSVVPARDIAAAEEIYYSNSDPTVHESHAKPLPSIDRSGTGRLGDTAGLGFFQSYGER
Sequences:
>Translated_158_residues MASYLIMTPPGAPADDERARFIADGFSWTAFFFPGPWLIVKGAWLVGIPVATLQILLLLAASMPGGFGAALLIHLALGLI VSLEGPLLVARHLSTRDWTLRSVVPARDIAAAEEIYYSNSDPTVHESHAKPLPSIDRSGTGRLGDTAGLGFFQSYGER >Mature_157_residues ASYLIMTPPGAPADDERARFIADGFSWTAFFFPGPWLIVKGAWLVGIPVATLQILLLLAASMPGGFGAALLIHLALGLIV SLEGPLLVARHLSTRDWTLRSVVPARDIAAAEEIYYSNSDPTVHESHAKPLPSIDRSGTGRLGDTAGLGFFQSYGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16918; Mature: 16786
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYLIMTPPGAPADDERARFIADGFSWTAFFFPGPWLIVKGAWLVGIPVATLQILLLLA CCCEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCEECCHHHHHHHHHHHH ASMPGGFGAALLIHLALGLIVSLEGPLLVARHLSTRDWTLRSVVPARDIAAAEEIYYSNS HCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHCCCHHHHHHHHHHEECCC DPTVHESHAKPLPSIDRSGTGRLGDTAGLGFFQSYGER CCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure ASYLIMTPPGAPADDERARFIADGFSWTAFFFPGPWLIVKGAWLVGIPVATLQILLLLA CCEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCEECCHHHHHHHHHHHH ASMPGGFGAALLIHLALGLIVSLEGPLLVARHLSTRDWTLRSVVPARDIAAAEEIYYSNS HCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHCCCHHHHHHHHHHEECCC DPTVHESHAKPLPSIDRSGTGRLGDTAGLGFFQSYGER CCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA