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The map label for this gene is hslR [C]

Identifier: 150398308

GI number: 150398308

Start: 3261454

End: 3261867

Strand: Reverse

Name: hslR [C]

Synonym: Smed_3114

Alternate gene names: 150398308

Gene position: 3261867-3261454 (Counterclockwise)

Preceding gene: 150398309

Following gene: 150398307

Centisome position: 86.25

GC content: 66.91

Gene sequence:

>414_bases
ATGGAAAAACAGCCGCCGTCCGCCCCTGCAACGCGTCAGCGGCTCGACAAATGGCTGTTCTTTGCCCGGCTGATCAAATC
GCGCTCGCTCGCTCAGAAGGCGATCGAGGCCGGTCACGTGGTGGTCAACGGCAAACGTGAAACGCAATCGTCCGCCCAGA
TAAAGGCCGGAGACATGCTCGAAGTGTCGCTGGAGCGGCGCGATCTGGTCTTGCGGGTGCTGCTGCCTGGGTCCCGCCGA
GGGCCCTACGAGGAAGCCCGTCTGCTTTACGAGGATCTCACGCCCGCCGCGCCCGCCGGCAAGCCCACGCTTTACGAGCA
GGCGACGCGAGACCGCGGAGCAGGGCGGCCGACGAAGCGGGAGCGTCGCGAAACCGACCGGCTGCGGCCGGGCGCGGACC
ACGAGGACGATTGA

Upstream 100 bases:

>100_bases
CGAGGGGCGCCCGCCACGCAAGGAGAAGCCGATCGATCCGGATTCACCTTTCGCCAAGCTGGCTGCTCTGAAGGAGCAGA
TGAAGAAATAGGTTCGGGCC

Downstream 100 bases:

>100_bases
GTTTCGTCGCGCCGGGCACCGTCGGGACGCCCGATTGCCCTTCCTTTCAGGTGCCCTGCAACGGAATTCGGCACGCCGGT
CCCGAGGCTGGAAAACTGTG

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: Ribosome-Associated Heat Shock Protein; Hsp15 Family Heat Shock Protein; Hsp15-Like Protein; S4 Domain Protein; Heat Shock Protein Hsp; Ribosome-Associated Heat Shock Protein Hsp; HEAT Shock-Like Protein; Ribosome-Associated Heat Shock Protein HSP

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MEKQPPSAPATRQRLDKWLFFARLIKSRSLAQKAIEAGHVVVNGKRETQSSAQIKAGDMLEVSLERRDLVLRVLLPGSRR
GPYEEARLLYEDLTPAAPAGKPTLYEQATRDRGAGRPTKRERRETDRLRPGADHEDD

Sequences:

>Translated_137_residues
MEKQPPSAPATRQRLDKWLFFARLIKSRSLAQKAIEAGHVVVNGKRETQSSAQIKAGDMLEVSLERRDLVLRVLLPGSRR
GPYEEARLLYEDLTPAAPAGKPTLYEQATRDRGAGRPTKRERRETDRLRPGADHEDD
>Mature_137_residues
MEKQPPSAPATRQRLDKWLFFARLIKSRSLAQKAIEAGHVVVNGKRETQSSAQIKAGDMLEVSLERRDLVLRVLLPGSRR
GPYEEARLLYEDLTPAAPAGKPTLYEQATRDRGAGRPTKRERRETDRLRPGADHEDD

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15486; Mature: 15486

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQPPSAPATRQRLDKWLFFARLIKSRSLAQKAIEAGHVVVNGKRETQSSAQIKAGDML
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEE
EVSLERRDLVLRVLLPGSRRGPYEEARLLYEDLTPAAPAGKPTLYEQATRDRGAGRPTKR
EEEHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHH
ERRETDRLRPGADHEDD
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEKQPPSAPATRQRLDKWLFFARLIKSRSLAQKAIEAGHVVVNGKRETQSSAQIKAGDML
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEE
EVSLERRDLVLRVLLPGSRRGPYEEARLLYEDLTPAAPAGKPTLYEQATRDRGAGRPTKR
EEEHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHH
ERRETDRLRPGADHEDD
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA