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The map label for this gene is 150398283

Identifier: 150398283

GI number: 150398283

Start: 3235570

End: 3236160

Strand: Reverse

Name: 150398283

Synonym: Smed_3089

Alternate gene names: NA

Gene position: 3236160-3235570 (Counterclockwise)

Preceding gene: 150398284

Following gene: 150398277

Centisome position: 85.57

GC content: 59.9

Gene sequence:

>591_bases
GTGACGATCGCGGCCGGCTCGGACGACAACCGGCAGCGACGCGCGGCACTCTTGCTGCTTGCCTGCCTCGCTGTGCTGGC
ACTCCAGATCCTGGTGCTGCATCTGATGGGGCGGCTGTGGATCTGCGAATGCGGCTACATCAAGCTGTGGGAAGGCGTCG
CCAAATCCAGCGGTAATTCGCAGCACGTTTCCGATTGGTACACACCGTCCCATATCATTCACGGATTCCTCTTCTACGGC
CTCGGTCATCTTCTCATGCGCGGTAAGCCCTTGAGCGGGCGCCTGCTTCTCGCGACCGTGATCGAGTCCGCCTGGGAGAT
TCTTGAGAACACGCCGATGGTGATCAACCGCTATCGGTCCGCAACCATTTCGCTCGATTATTTCGGTGACAGCATCCTGA
ACTCGACCATGGATACGCTTGCCATGGCGACAGGCTTCCTCATCGCTTCCCGGTTGCCGGTGGCAGTGACCGTCGCTATC
GCGATCGCTCTCGAACTCTTCACCGGCTTTATGGTGCGCGACAATCTGACGCTCAACGTGCTGATGCTGGTGTGGCCGAT
GGATGCGGTGAAGGCGTGGCAGGCCGGATGA

Upstream 100 bases:

>100_bases
TCGCCTTCAAGGTCTGGGGCACCATGCCGATCACCATTCTTTTCACGCTCGCGCAGATGCCGCTGATCATGAAGCATTCG
GTCGATCAGGAAAACGCGAA

Downstream 100 bases:

>100_bases
GGGCTACGACCCGGCAAGCGCTTTTTCGATCGCCGGCAGCAGCCCTTCCCTGAGGCTCTTCTCGTCGAAGGGCCCGGCAC
GCTTGTAGAGGATCGTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTIAAGSDDNRQRRAALLLLACLAVLALQILVLHLMGRLWICECGYIKLWEGVAKSSGNSQHVSDWYTPSHIIHGFLFYG
LGHLLMRGKPLSGRLLLATVIESAWEILENTPMVINRYRSATISLDYFGDSILNSTMDTLAMATGFLIASRLPVAVTVAI
AIALELFTGFMVRDNLTLNVLMLVWPMDAVKAWQAG

Sequences:

>Translated_196_residues
MTIAAGSDDNRQRRAALLLLACLAVLALQILVLHLMGRLWICECGYIKLWEGVAKSSGNSQHVSDWYTPSHIIHGFLFYG
LGHLLMRGKPLSGRLLLATVIESAWEILENTPMVINRYRSATISLDYFGDSILNSTMDTLAMATGFLIASRLPVAVTVAI
AIALELFTGFMVRDNLTLNVLMLVWPMDAVKAWQAG
>Mature_195_residues
TIAAGSDDNRQRRAALLLLACLAVLALQILVLHLMGRLWICECGYIKLWEGVAKSSGNSQHVSDWYTPSHIIHGFLFYGL
GHLLMRGKPLSGRLLLATVIESAWEILENTPMVINRYRSATISLDYFGDSILNSTMDTLAMATGFLIASRLPVAVTVAIA
IALELFTGFMVRDNLTLNVLMLVWPMDAVKAWQAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0314 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3089_SINMW (A6UE35)

Other databases:

- EMBL:   CP000738
- RefSeq:   YP_001328750.1
- STRING:   A6UE35
- GeneID:   5323968
- GenomeReviews:   CP000738_GR
- KEGG:   smd:Smed_3089
- eggNOG:   NOG40543
- HOGENOM:   HBG299577
- OMA:   SHIIHGF
- ProtClustDB:   PRK00944
- BioCyc:   SMED366394:SMED_3089-MONOMER
- HAMAP:   MF_01514
- InterPro:   IPR019691

Pfam domain/function: PF10755 DUF2585

EC number: NA

Molecular weight: Translated: 21607; Mature: 21476

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21f83e50)-; HASH(0x24a84cd8)-; HASH(0x23dafbe4)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAAGSDDNRQRRAALLLLACLAVLALQILVLHLMGRLWICECGYIKLWEGVAKSSGNS
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
QHVSDWYTPSHIIHGFLFYGLGHLLMRGKPLSGRLLLATVIESAWEILENTPMVINRYRS
CCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATISLDYFGDSILNSTMDTLAMATGFLIASRLPVAVTVAIAIALELFTGFMVRDNLTLNV
HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEH
LMLVWPMDAVKAWQAG
HHHHHCHHHHHHHCCH
>Mature Secondary Structure 
TIAAGSDDNRQRRAALLLLACLAVLALQILVLHLMGRLWICECGYIKLWEGVAKSSGNS
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
QHVSDWYTPSHIIHGFLFYGLGHLLMRGKPLSGRLLLATVIESAWEILENTPMVINRYRS
CCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATISLDYFGDSILNSTMDTLAMATGFLIASRLPVAVTVAIAIALELFTGFMVRDNLTLNV
HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEH
LMLVWPMDAVKAWQAG
HHHHHCHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA