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The map label for this gene is prmA [C]

Identifier: 150398158

GI number: 150398158

Start: 3108787

End: 3109443

Strand: Reverse

Name: prmA [C]

Synonym: Smed_2961

Alternate gene names: 150398158

Gene position: 3109443-3108787 (Counterclockwise)

Preceding gene: 150398159

Following gene: 150398156

Centisome position: 82.22

GC content: 64.99

Gene sequence:

>657_bases
GTGAGGACCGATCCGGAAAGTTTCGTCCGCGCCAACACCGGCATTCTTATGCCGCCGCACGTACCGGAAATCCGCCTGCA
TCTTGCGAGCGAGGCGCATGAGCTTTGGCTGAAGACCGAGGAAGAGCTGGAACAGATCGGTCTGCCGCCGCCCTTTTGGG
CCTTTGCCTGGGCGGGCGGGCAGGGGCTCGCACGTTTCATCCTTGATCATCCCGAAACGGTGCGCGGCCGCCGCGTCGTC
GATTTCGCTTCCGGTTCCGGCCTCGTCGCCATCGCGGCGAAGATGGCCGGCGCCGACGAAGTCGTGGCCGCCGACATCGA
TCCTTGGTGCGAAACAGCCGCGCGGCTGAATGCGGAACTCAACGGTGTGTCGCTCGCCTTTGCCGCCGCCGATATCGTTG
GATCGGAACGGGCAGCCGATGTTTACCTCGCCGGAGACGTCTTCTACGACAAGAGCTTCGCCGCCCTGCTTTTGCCCTGG
TTCGATGCACTCGAACGTGCCGGTGCTGTCGTCCTGGTCGGCGATCCTGGTCGGGCCTATTGTCCGCGCGAGCGGATGAC
GCCGCTTGCGACCTACGAGGTCCCGGTGACGCGGGCGCTCGAAGACTGCGAGGTGAAGCGCACGACGGTCTGGCGATTCG
GTCAGGCGGCCTCGTGA

Upstream 100 bases:

>100_bases
TCGATGCGCCTTTCGGTACAGCCGGTAACCGAGGACGAGTGGGTAGAGGTCTGCCGCATGGGCGGCCTCGATACTTCGCC
CCGTTGAACCCGCAAGCATC

Downstream 100 bases:

>100_bases
CAGCGACGATCGACGGGAGCGTCCGCCTCCTACGGCCGAACGACGCAGACGCCGCGCTCCCACGAGCATGCGCTGGCATT
GACCTGAGGCGATAGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Small; Methyltransferase Protein; Methyltransferase Type; SAM-Dependent Methyltransferease Protein; Methyltransferase-Like Protein; C12orf72 Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRTDPESFVRANTGILMPPHVPEIRLHLASEAHELWLKTEEELEQIGLPPPFWAFAWAGGQGLARFILDHPETVRGRRVV
DFASGSGLVAIAAKMAGADEVVAADIDPWCETAARLNAELNGVSLAFAAADIVGSERAADVYLAGDVFYDKSFAALLLPW
FDALERAGAVVLVGDPGRAYCPRERMTPLATYEVPVTRALEDCEVKRTTVWRFGQAAS

Sequences:

>Translated_218_residues
MRTDPESFVRANTGILMPPHVPEIRLHLASEAHELWLKTEEELEQIGLPPPFWAFAWAGGQGLARFILDHPETVRGRRVV
DFASGSGLVAIAAKMAGADEVVAADIDPWCETAARLNAELNGVSLAFAAADIVGSERAADVYLAGDVFYDKSFAALLLPW
FDALERAGAVVLVGDPGRAYCPRERMTPLATYEVPVTRALEDCEVKRTTVWRFGQAAS
>Mature_218_residues
MRTDPESFVRANTGILMPPHVPEIRLHLASEAHELWLKTEEELEQIGLPPPFWAFAWAGGQGLARFILDHPETVRGRRVV
DFASGSGLVAIAAKMAGADEVVAADIDPWCETAARLNAELNGVSLAFAAADIVGSERAADVYLAGDVFYDKSFAALLLPW
FDALERAGAVVLVGDPGRAYCPRERMTPLATYEVPVTRALEDCEVKRTTVWRFGQAAS

Specific function: Methylates Ribosomal Protein L11. [C]

COG id: COG3897

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209529731, Length=223, Percent_Identity=34.9775784753363, Blast_Score=117, Evalue=7e-27,
Organism=Homo sapiens, GI209529729, Length=223, Percent_Identity=34.9775784753363, Blast_Score=117, Evalue=7e-27,
Organism=Homo sapiens, GI28603834, Length=223, Percent_Identity=34.9775784753363, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI115533699, Length=204, Percent_Identity=35.7843137254902, Blast_Score=123, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 23721; Mature: 23721

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDPESFVRANTGILMPPHVPEIRLHLASEAHELWLKTEEELEQIGLPPPFWAFAWAGG
CCCCHHHHHHCCCCEECCCCCCHHEEEEHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECC
QGLARFILDHPETVRGRRVVDFASGSGLVAIAAKMAGADEVVAADIDPWCETAARLNAEL
HHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCEEEECCCHHHHHHHHHCCCC
NGVSLAFAAADIVGSERAADVYLAGDVFYDKSFAALLLPWFDALERAGAVVLVGDPGRAY
CCEEEEEHHHHHHCCCCCCEEEEECEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCC
CPRERMTPLATYEVPVTRALEDCEVKRTTVWRFGQAAS
CCHHHCCCEEEECCCHHHHHHHCCCCHHHEEECCCCCC
>Mature Secondary Structure
MRTDPESFVRANTGILMPPHVPEIRLHLASEAHELWLKTEEELEQIGLPPPFWAFAWAGG
CCCCHHHHHHCCCCEECCCCCCHHEEEEHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECC
QGLARFILDHPETVRGRRVVDFASGSGLVAIAAKMAGADEVVAADIDPWCETAARLNAEL
HHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCEEEECCCHHHHHHHHHCCCC
NGVSLAFAAADIVGSERAADVYLAGDVFYDKSFAALLLPWFDALERAGAVVLVGDPGRAY
CCEEEEEHHHHHHCCCCCCEEEEECEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCC
CPRERMTPLATYEVPVTRALEDCEVKRTTVWRFGQAAS
CCHHHCCCEEEECCCHHHHHHHCCCCHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA