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The map label for this gene is atpC [H]

Identifier: 150398118

GI number: 150398118

Start: 3065506

End: 3065910

Strand: Reverse

Name: atpC [H]

Synonym: Smed_2921

Alternate gene names: 150398118

Gene position: 3065910-3065506 (Counterclockwise)

Preceding gene: 150398119

Following gene: 150398116

Centisome position: 81.07

GC content: 63.46

Gene sequence:

>405_bases
ATGGCCGAAACTTTCAATTTTGAGCTTGTTTCCCCCGAGCGCCTGCTGGTCTCGGAGACGGTGACGGAAGTCGTCATTCC
GGCGACCGAGGGCGAGATGACCGTGATGGCCAATCACGCGCCGACCATGACGACCGTCCGGCCGGGCGTAGTCGCGGTGA
AAACCGCCGCCGGCAATACCGAACGCTACGCCGTTTTCGGCGGTTTTGCCGACATCCTGCCGACCGGCTGCACGCTGCTG
GCCGAATCCGCCGTCCATGTCGACGAGCTGGACAGCACGGTTCTCGAGAACCGCATCGAAGCGGCACGTGCCGAACTCGA
AGGCGCGAGCGACGAGAAGAAAACCCGCCTGGAGCAACTCGTCGCCGAACTCACGAAGCTCGGGGAGATCGTGATCCCGG
CCTGA

Upstream 100 bases:

>100_bases
GCACATTTCGCGCCACGGCCTTCGTCCCGCCGCGATCAGTGACGGCGGAGAACGTGCACAGCCCGCCGACCCGCGGCGCG
CTCACCAGAAGTGAATGGTC

Downstream 100 bases:

>100_bases
AAGGGACATCCCGATAAGGGATAATGCCTATCCAACCCCGCCTCGAGCGGGGTTTTTCGTTTCTGGACAGACCATGCCGT
TCACCTCGAGAAGGAGCACG

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAETFNFELVSPERLLVSETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGNTERYAVFGGFADILPTGCTLL
AESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLEQLVAELTKLGEIVIPA

Sequences:

>Translated_134_residues
MAETFNFELVSPERLLVSETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGNTERYAVFGGFADILPTGCTLL
AESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLEQLVAELTKLGEIVIPA
>Mature_133_residues
AETFNFELVSPERLLVSETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGNTERYAVFGGFADILPTGCTLLA
ESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLEQLVAELTKLGEIVIPA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=127, Percent_Identity=30.7086614173228, Blast_Score=66, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 14313; Mature: 14182

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETFNFELVSPERLLVSETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGNT
CCCCCEEEEECCHHHHHHHHHHHEEEECCCCCEEEEECCCCCEEEECCCEEEEEECCCCC
ERYAVFGGFADILPTGCTLLAESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLEQL
CEEEEECCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VAELTKLGEIVIPA
HHHHHHCCCEECCC
>Mature Secondary Structure 
AETFNFELVSPERLLVSETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGNT
CCCCEEEEECCHHHHHHHHHHHEEEECCCCCEEEEECCCCCEEEECCCEEEEEECCCCC
ERYAVFGGFADILPTGCTLLAESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLEQL
CEEEEECCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VAELTKLGEIVIPA
HHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]