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The map label for this gene is fdhD [H]

Identifier: 150398094

GI number: 150398094

Start: 3037478

End: 3038386

Strand: Reverse

Name: fdhD [H]

Synonym: Smed_2896

Alternate gene names: 150398094

Gene position: 3038386-3037478 (Counterclockwise)

Preceding gene: 150398095

Following gene: 150398093

Centisome position: 80.34

GC content: 66.34

Gene sequence:

>909_bases
ATGGCGGGCAAGCGCGTTTCGACCTCTCCAACGGTTGTTCCGGCCGGCGCCGGCGGCGCGCCCCGACCAGGAACGACGGC
GACGGTTGCCGAGGCTGCACGGCGCGGCGGTATCTTCGTCGCGCAATCGCGGGTGGTGCCCGAGGAAATGCCGGTTGCCT
TCACCTATGGCGGTTCGACTCATGCGGTGATGATGGCGACGCCCGCCGACCTCGAGGATTTCGCCACCGGCTTCAGCCTC
ACTGAAGGGATCATCACCGGTCCCGAACAGATAGACGACATAGACATCGTTGCCGAGGAGAAGGGCATCGACCTGCAGAT
CAGGCTCAAGGACGAGCAGAACGACGCTCTGCGCCTCAGGCGTCGCCACATGGCCGGGCCGGTCGGTTGCGGCCTCTGCG
GTATAGAGTCGATCGACGAGGCCGTTCGCCCGACGCCGGACGTCTCCGGCTCGCTGCTTCGCCTTTCCGAGCAGGACGTG
GTGGACGCAGTCGCGCTTCTCAATGGTCAGCAGCCGCTGCATTTCGAGACACGCGCCGTCCACGGTGCTGCCTTCTATGT
GCCGGGGCGCGGGCTGATCGCGGTTCGCGAGGATGTCGGTCGCCATAATGCGCTGGACAAGCTCACCGGAGCGGCCGCCC
GCGCCGGGTTCAGGGGCGCTCAAGGCGCAGTCGTCGTCACCTCGCGCGTCTCGGTCGAGATGGTGCAGAAAACCGCGATC
GCCGGAAGCCCGGTGATCATCGCCATTTCCGCACCCACGGCGCTCGCGATCCGCACGGCGGAGGGGGCGGGCATGACCCT
CATTGCGCTTGTCCGCGGTGACGAGTTTGAAATCTTCACCCATGCGGAGCGCATCGCTCGCCATGACGAGGTGCCTGCGT
CCTTATCCGCCCGCGCACCGCTATTCTGA

Upstream 100 bases:

>100_bases
CGTCGAACGGCCCCTCCGACTGGCAGCGTGATTATGATGAGCAGGCGCGCCAGTCGCGTCGCATCGCCGGCAAGCTGGAG
GCGGCGGAATAGGATCGGGC

Downstream 100 bases:

>100_bases
ATCGGAGCAATTCGCCCATGTCTGAAAACCCGAACGCCAAGCTCATTTATATGGCGAACCAGATTGCCACCTTCTTCCTG
ACTCAGCCGGCGGCAGGGGC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MAGKRVSTSPTVVPAGAGGAPRPGTTATVAEAARRGGIFVAQSRVVPEEMPVAFTYGGSTHAVMMATPADLEDFATGFSL
TEGIITGPEQIDDIDIVAEEKGIDLQIRLKDEQNDALRLRRRHMAGPVGCGLCGIESIDEAVRPTPDVSGSLLRLSEQDV
VDAVALLNGQQPLHFETRAVHGAAFYVPGRGLIAVREDVGRHNALDKLTGAAARAGFRGAQGAVVVTSRVSVEMVQKTAI
AGSPVIIAISAPTALAIRTAEGAGMTLIALVRGDEFEIFTHAERIARHDEVPASLSARAPLF

Sequences:

>Translated_302_residues
MAGKRVSTSPTVVPAGAGGAPRPGTTATVAEAARRGGIFVAQSRVVPEEMPVAFTYGGSTHAVMMATPADLEDFATGFSL
TEGIITGPEQIDDIDIVAEEKGIDLQIRLKDEQNDALRLRRRHMAGPVGCGLCGIESIDEAVRPTPDVSGSLLRLSEQDV
VDAVALLNGQQPLHFETRAVHGAAFYVPGRGLIAVREDVGRHNALDKLTGAAARAGFRGAQGAVVVTSRVSVEMVQKTAI
AGSPVIIAISAPTALAIRTAEGAGMTLIALVRGDEFEIFTHAERIARHDEVPASLSARAPLF
>Mature_301_residues
AGKRVSTSPTVVPAGAGGAPRPGTTATVAEAARRGGIFVAQSRVVPEEMPVAFTYGGSTHAVMMATPADLEDFATGFSLT
EGIITGPEQIDDIDIVAEEKGIDLQIRLKDEQNDALRLRRRHMAGPVGCGLCGIESIDEAVRPTPDVSGSLLRLSEQDVV
DAVALLNGQQPLHFETRAVHGAAFYVPGRGLIAVREDVGRHNALDKLTGAAARAGFRGAQGAVVVTSRVSVEMVQKTAIA
GSPVIIAISAPTALAIRTAEGAGMTLIALVRGDEFEIFTHAERIARHDEVPASLSARAPLF

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=242, Percent_Identity=42.9752066115703, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31557; Mature: 31426

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKRVSTSPTVVPAGAGGAPRPGTTATVAEAARRGGIFVAQSRVVPEEMPVAFTYGGST
CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCC
HAVMMATPADLEDFATGFSLTEGIITGPEQIDDIDIVAEEKGIDLQIRLKDEQNDALRLR
EEEEEECCCCHHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHH
RRHMAGPVGCGLCGIESIDEAVRPTPDVSGSLLRLSEQDVVDAVALLNGQQPLHFETRAV
HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEE
HGAAFYVPGRGLIAVREDVGRHNALDKLTGAAARAGFRGAQGAVVVTSRVSVEMVQKTAI
CCEEEEECCCCEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHC
AGSPVIIAISAPTALAIRTAEGAGMTLIALVRGDEFEIFTHAERIARHDEVPASLSARAP
CCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCEEEEHHHHHHHHHCCCCCCCCCCCC
LF
CC
>Mature Secondary Structure 
AGKRVSTSPTVVPAGAGGAPRPGTTATVAEAARRGGIFVAQSRVVPEEMPVAFTYGGST
CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCC
HAVMMATPADLEDFATGFSLTEGIITGPEQIDDIDIVAEEKGIDLQIRLKDEQNDALRLR
EEEEEECCCCHHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHH
RRHMAGPVGCGLCGIESIDEAVRPTPDVSGSLLRLSEQDVVDAVALLNGQQPLHFETRAV
HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEE
HGAAFYVPGRGLIAVREDVGRHNALDKLTGAAARAGFRGAQGAVVVTSRVSVEMVQKTAI
CCEEEEECCCCEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHC
AGSPVIIAISAPTALAIRTAEGAGMTLIALVRGDEFEIFTHAERIARHDEVPASLSARAP
CCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCEEEEHHHHHHHHHCCCCCCCCCCCC
LF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]