| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398093
Identifier: 150398093
GI number: 150398093
Start: 3037230
End: 3037460
Strand: Reverse
Name: 150398093
Synonym: Smed_2895
Alternate gene names: NA
Gene position: 3037460-3037230 (Counterclockwise)
Preceding gene: 150398094
Following gene: 150398092
Centisome position: 80.32
GC content: 57.58
Gene sequence:
>231_bases ATGTCTGAAAACCCGAACGCCAAGCTCATTTATATGGCGAACCAGATTGCCACCTTCTTCCTGACTCAGCCGGCGGCAGG GGCGGCCGATGGCGTGGCGACGCATATCAACAAATATTGGGAGCCGCGCATGCGCCGCAAACTCTTCGAGCATATCGCGC ATGGCGGTGAAGGTTTGAACCCGCTGGTGCTCGAGGCGGCTGAGAAAATCCGTCGTCCGGAAGCGGTTTAA
Upstream 100 bases:
>100_bases TTGAAATCTTCACCCATGCGGAGCGCATCGCTCGCCATGACGAGGTGCCTGCGTCCTTATCCGCCCGCGCACCGCTATTC TGAATCGGAGCAATTCGCCC
Downstream 100 bases:
>100_bases GGCACTTCAGGAAGGCTCGTCCCCTTCGTGCTTTGCGGTATTGGCAGGGAGAGCGGCGCGTTCGGGTTGCGCGGTATCGC TGCACCTATTCCCCTCATTC
Product: putative NAD-dependent formate dehydrogenase subunit delta
Products: CO2; NADH
Alternate protein names: NAD-Dependent Formate Dehydrogenase; NAD-Dependent Formate Dehydrogenase Delta Subunit Protein; Formate Dehydrogenase Delta Subunit; Formate Dehydrogenase Protein Delta Subunit
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSENPNAKLIYMANQIATFFLTQPAAGAADGVATHINKYWEPRMRRKLFEHIAHGGEGLNPLVLEAAEKIRRPEAV
Sequences:
>Translated_76_residues MSENPNAKLIYMANQIATFFLTQPAAGAADGVATHINKYWEPRMRRKLFEHIAHGGEGLNPLVLEAAEKIRRPEAV >Mature_75_residues SENPNAKLIYMANQIATFFLTQPAAGAADGVATHINKYWEPRMRRKLFEHIAHGGEGLNPLVLEAAEKIRRPEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.1.2
Molecular weight: Translated: 8473; Mature: 8342
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENPNAKLIYMANQIATFFLTQPAAGAADGVATHINKYWEPRMRRKLFEHIAHGGEGLN CCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC PLVLEAAEKIRRPEAV HHHHHHHHHHCCCCCC >Mature Secondary Structure SENPNAKLIYMANQIATFFLTQPAAGAADGVATHINKYWEPRMRRKLFEHIAHGGEGLN CCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC PLVLEAAEKIRRPEAV HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formate; NAD+
Specific reaction: formate + NAD+ = CO2 + NADH
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA