| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is frlB [H]
Identifier: 150398042
GI number: 150398042
Start: 2970719
End: 2971732
Strand: Direct
Name: frlB [H]
Synonym: Smed_2844
Alternate gene names: 150398042
Gene position: 2970719-2971732 (Clockwise)
Preceding gene: 150398040
Following gene: 150398043
Centisome position: 78.55
GC content: 61.14
Gene sequence:
>1014_bases ATGCTGAATTTTGACGAACAGAGATTCCTTCGCATCCAGTCGGGAGCCGTTGCCCTGCGCAAACGCCTGGACGACGTCAT CATCTCCTGCCTTGAAAAAGGCGCGGAGAACATCTTCTTCCTCGGGACGGGCGGCGCCGCCATCCTCATGCAGCCTGCCG CCCAATTGCTGCAACGCAGGTCGCGCTTCCCGGCCTTCATCGACATGCCTGCCGAACTCTTCCTTACCGGTTCGGCGAAC CTGACGGAAAAGTCGATCGTCGTCATTCCCTCCCTCTCCGGCACGACCAAGGAAAGTGTGGCTCTGCTGGCAAAGGCCAA GGAGGCCGGCGCGACAGTCCTGACGCTCGTCGGACACGCGGAAACGCCGCTCGGCAAAGGGGCCGATCATGCCTTCGTCA ACTTCGCCGAAGACGACACGTCCTGCGAGTCCTTCTATCTGCAATCCCTGTTCATCGCCCTTTCGATCATGCGGCACCGC GGCGAGATCGAAAACTACGAGCAGATCGCAGCTGAACTGGAAACCCTCCCGCAGCTCCTCCTGGAGGTAAAGCGCGCCTA TGAGGATAAGGCTGAAGCCTTCGCCCGTGTTCTGGCCGGTTCGGACTACCACATCATCACGGGCGCCGGTAACGTCTGGC CGGAGGCCTTCTACTATGGCATGTGCATCCTCGAAGAGATGCAGTGGATCCGCACGCGCCCTGTGCATGCCTCGGACTTT TTCCATGGAACGCTGGAACTCGTGGAAAAGGGCGTCAGCGTCATCCTCTTCAAGGGCGAAGACGCGCTGCGGCCGCTCGG CGATCGTGTGCAGAATTTCGCCCCCAACTACACGGACAGACTGACGGTACTCGACACTGCGGACTTCGCGCTCCCGGGCG TTTCCGACGAGGTGCGCGGCCTCGTGTCGCCGATCGTGCTCGCAAGCGTGCTCGAACGCATCAGCGCGCATCTGGAAGTC ATGCGCGATCACCCGCTGACGACGCGGCGCTACTACAAGCGCGTGGCCTATTGA
Upstream 100 bases:
>100_bases GATATTGCCCTTGACATCGTTGAGCAATGTTGTCAGTTGTCTTACAACATTGCCGGAATATCGAGCGCCGGCAGTCGCCA CCACCTGTCGAGAGAGAACC
Downstream 100 bases:
>100_bases ACAGAGACCTCCAAAGCGGAATGCTCCGAGACGACCGCGAATGTCTCCACATTCGCGGTCGCCCGTGCAAGACAAGAGAA CGCCATGACCAAATTTCGCT
Product: sugar isomerase (SIS)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLNFDEQRFLRIQSGAVALRKRLDDVIISCLEKGAENIFFLGTGGAAILMQPAAQLLQRRSRFPAFIDMPAELFLTGSAN LTEKSIVVIPSLSGTTKESVALLAKAKEAGATVLTLVGHAETPLGKGADHAFVNFAEDDTSCESFYLQSLFIALSIMRHR GEIENYEQIAAELETLPQLLLEVKRAYEDKAEAFARVLAGSDYHIITGAGNVWPEAFYYGMCILEEMQWIRTRPVHASDF FHGTLELVEKGVSVILFKGEDALRPLGDRVQNFAPNYTDRLTVLDTADFALPGVSDEVRGLVSPIVLASVLERISAHLEV MRDHPLTTRRYYKRVAY
Sequences:
>Translated_337_residues MLNFDEQRFLRIQSGAVALRKRLDDVIISCLEKGAENIFFLGTGGAAILMQPAAQLLQRRSRFPAFIDMPAELFLTGSAN LTEKSIVVIPSLSGTTKESVALLAKAKEAGATVLTLVGHAETPLGKGADHAFVNFAEDDTSCESFYLQSLFIALSIMRHR GEIENYEQIAAELETLPQLLLEVKRAYEDKAEAFARVLAGSDYHIITGAGNVWPEAFYYGMCILEEMQWIRTRPVHASDF FHGTLELVEKGVSVILFKGEDALRPLGDRVQNFAPNYTDRLTVLDTADFALPGVSDEVRGLVSPIVLASVLERISAHLEV MRDHPLTTRRYYKRVAY >Mature_337_residues MLNFDEQRFLRIQSGAVALRKRLDDVIISCLEKGAENIFFLGTGGAAILMQPAAQLLQRRSRFPAFIDMPAELFLTGSAN LTEKSIVVIPSLSGTTKESVALLAKAKEAGATVLTLVGHAETPLGKGADHAFVNFAEDDTSCESFYLQSLFIALSIMRHR GEIENYEQIAAELETLPQLLLEVKRAYEDKAEAFARVLAGSDYHIITGAGNVWPEAFYYGMCILEEMQWIRTRPVHASDF FHGTLELVEKGVSVILFKGEDALRPLGDRVQNFAPNYTDRLTVLDTADFALPGVSDEVRGLVSPIVLASVLERISAHLEV MRDHPLTTRRYYKRVAY
Specific function: Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Escherichia coli, GI87082251, Length=302, Percent_Identity=23.1788079470199, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 37398; Mature: 37398
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFDEQRFLRIQSGAVALRKRLDDVIISCLEKGAENIFFLGTGGAAILMQPAAQLLQRR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH SRFPAFIDMPAELFLTGSANLTEKSIVVIPSLSGTTKESVALLAKAKEAGATVLTLVGHA HCCCEEECCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCC ETPLGKGADHAFVNFAEDDTSCESFYLQSLFIALSIMRHRGEIENYEQIAAELETLPQLL CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LEVKRAYEDKAEAFARVLAGSDYHIITGAGNVWPEAFYYGMCILEEMQWIRTRPVHASDF HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH FHGTLELVEKGVSVILFKGEDALRPLGDRVQNFAPNYTDRLTVLDTADFALPGVSDEVRG HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHH LVSPIVLASVLERISAHLEVMRDHPLTTRRYYKRVAY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MLNFDEQRFLRIQSGAVALRKRLDDVIISCLEKGAENIFFLGTGGAAILMQPAAQLLQRR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH SRFPAFIDMPAELFLTGSANLTEKSIVVIPSLSGTTKESVALLAKAKEAGATVLTLVGHA HCCCEEECCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCC ETPLGKGADHAFVNFAEDDTSCESFYLQSLFIALSIMRHRGEIENYEQIAAELETLPQLL CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LEVKRAYEDKAEAFARVLAGSDYHIITGAGNVWPEAFYYGMCILEEMQWIRTRPVHASDF HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH FHGTLELVEKGVSVILFKGEDALRPLGDRVQNFAPNYTDRLTVLDTADFALPGVSDEVRG HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHH LVSPIVLASVLERISAHLEVMRDHPLTTRRYYKRVAY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]