| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is modB [H]
Identifier: 150398020
GI number: 150398020
Start: 2946480
End: 2947181
Strand: Direct
Name: modB [H]
Synonym: Smed_2822
Alternate gene names: 150398020
Gene position: 2946480-2947181 (Clockwise)
Preceding gene: 150398019
Following gene: 150398021
Centisome position: 77.91
GC content: 65.95
Gene sequence:
>702_bases TTGGACCTGTTGGCATTGACCGAAGCGGAGTGGACGGCAGTCCGCCTCAGCCTGCGGGTCGCCACCGTGGCGATGCTTGC AAGCCTACCATTCGCACTCCTGGTTTCGATGATCCTCGCACGCGGCCAGTTCTGGGGCAAATCGCTGCTCAACGGCCTCG TCCATATGCCGCTGATCCTGCCGCCGGTGGTCACCGGCTTTGCCCTGCTGCTCCTCTTCGGCCGGCGCGGGCCGGTCGGC GCCTTTCTCGCCGAAAACTTCGGCCTGGTCTTTTCCTTCCGCTGGACCGGGGCGGCGCTCGCCTGCGCGGTGATGGGCTT CCCATTGATGGTCCGCAGCATCCGGCTGTCGATCGAAGCGGTCGACCGCAAGCTCGAGGACGCGGCGGCGACGCTTGGCG CAAGCCCCGCCTGGATATTCCTGACGGTAACATTGCCCCTGATTCTTCCGGGCATCCTTGCCGGCATGGTCCTCTCCTTC GCCAAGGCGATGGGCGAGTTCGGGGCGACCATTACCTTCGTCTCCAATATTCCGGGTGAGACGCAGACGCTTTCCGCCGC GATCTACACCTTCACGCAGGTGCCGGGCGGCGATGCCGGCGCGATGCGCCTCGCCGCGATTTCCGTCATCATTTCGATGG CGGCGCTGATGCTTTCGGAAGCCATGGCCGCGGCCGCGGCCCGGCGGACGGTCGCGGCATGA
Upstream 100 bases:
>100_bases GAAGGCAGCGGCGCTTTTTGAGGCTGAGGGTTTTACGGTGCTGGAATAGCATCTGCCGAATGAATTGACGACACGGCGCA TCAGAAGCGGGAGCACGAGC
Downstream 100 bases:
>100_bases GGCTCCAGGTCGAAGCGCGCCTCAGGCTCGGCACTTTCGCGATCGATGCCGCCTTCGGTTCACAGGCCGGCGTAACCGCA CTTTTCGGCCGCTCCGGCTC
Product: molybdate ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDLLALTEAEWTAVRLSLRVATVAMLASLPFALLVSMILARGQFWGKSLLNGLVHMPLILPPVVTGFALLLLFGRRGPVG AFLAENFGLVFSFRWTGAALACAVMGFPLMVRSIRLSIEAVDRKLEDAAATLGASPAWIFLTVTLPLILPGILAGMVLSF AKAMGEFGATITFVSNIPGETQTLSAAIYTFTQVPGGDAGAMRLAAISVIISMAALMLSEAMAAAAARRTVAA
Sequences:
>Translated_233_residues MDLLALTEAEWTAVRLSLRVATVAMLASLPFALLVSMILARGQFWGKSLLNGLVHMPLILPPVVTGFALLLLFGRRGPVG AFLAENFGLVFSFRWTGAALACAVMGFPLMVRSIRLSIEAVDRKLEDAAATLGASPAWIFLTVTLPLILPGILAGMVLSF AKAMGEFGATITFVSNIPGETQTLSAAIYTFTQVPGGDAGAMRLAAISVIISMAALMLSEAMAAAAARRTVAA >Mature_233_residues MDLLALTEAEWTAVRLSLRVATVAMLASLPFALLVSMILARGQFWGKSLLNGLVHMPLILPPVVTGFALLLLFGRRGPVG AFLAENFGLVFSFRWTGAALACAVMGFPLMVRSIRLSIEAVDRKLEDAAATLGASPAWIFLTVTLPLILPGILAGMVLSF AKAMGEFGATITFVSNIPGETQTLSAAIYTFTQVPGGDAGAMRLAAISVIISMAALMLSEAMAAAAARRTVAA
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=224, Percent_Identity=55.8035714285714, Blast_Score=222, Evalue=1e-59, Organism=Escherichia coli, GI1788764, Length=181, Percent_Identity=37.0165745856354, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI87082099, Length=207, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24412; Mature: 24412
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLALTEAEWTAVRLSLRVATVAMLASLPFALLVSMILARGQFWGKSLLNGLVHMPLIL CCCEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH PPVVTGFALLLLFGRRGPVGAFLAENFGLVFSFRWTGAALACAVMGFPLMVRSIRLSIEA HHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH VDRKLEDAAATLGASPAWIFLTVTLPLILPGILAGMVLSFAKAMGEFGATITFVSNIPGE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC TQTLSAAIYTFTQVPGGDAGAMRLAAISVIISMAALMLSEAMAAAAARRTVAA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLLALTEAEWTAVRLSLRVATVAMLASLPFALLVSMILARGQFWGKSLLNGLVHMPLIL CCCEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH PPVVTGFALLLLFGRRGPVGAFLAENFGLVFSFRWTGAALACAVMGFPLMVRSIRLSIEA HHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH VDRKLEDAAATLGASPAWIFLTVTLPLILPGILAGMVLSFAKAMGEFGATITFVSNIPGE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC TQTLSAAIYTFTQVPGGDAGAMRLAAISVIISMAALMLSEAMAAAAARRTVAA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]