Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397991

Identifier: 150397991

GI number: 150397991

Start: 2913150

End: 2914526

Strand: Direct

Name: 150397991

Synonym: Smed_2793

Alternate gene names: NA

Gene position: 2913150-2914526 (Clockwise)

Preceding gene: 150397988

Following gene: 150397994

Centisome position: 77.03

GC content: 61.0

Gene sequence:

>1377_bases
ATGTCTCCAGGATGGCTCGCAATCCCTCGAACTGCCGCGATGGCCCTCACGTTAGCTGTTACCGGTTCTGCGCAGGCGGC
TGATGTTATTTTGACGCCGGCCCAGATGCGAGAGGATCTTACATTCTTAGTAGAGAAATGGGCGCCGCTCGATAAAAGCT
TCAGCGACAGCCAGAGGGCGGAGTTCGGCCGGCATGTCGATGAGACCGCGTCTGCGGCGGAAAATCTGGCGCCGGAAGAG
TTCGCGCTTGAAGTGATGAAAGCAGTGGCCATCGCGCGCAACGGACACACCAACGCCAATGTCGGGACGTTGCTTGGCGC
CGACCTTCCCGTGCGCGTGTGGACGTTTTCCGATGGGCTTTATATCGTCAAGACTCACCCCGATTTCAAACGGTTGCTTG
GCGCGCGCGTCGTCGGGATCGGCTCCCTGACCACGCAGGAAGCGCTCGACCGGGTGCGTGCCTACCTTCCCGGCACGGAC
CAGCGGATTCGTTTTCTCTCGCCCGGCTATCTGGTTGCGCCCGCCGTCCTCGAGCGGATCGGCGCCGTCGACGGCACGGA
CCGCATTCCGTTGACCTTGCAGTTTGACGATGGACGGACGGAGATCGTCGAGCTTGCGCCTATGAAAGGCGAAGATCCCG
GCGATGAGCGCAAGGCAAGCCTGAACAGGGGCTATTCCGTGCTTATTCCCGACGATCCGGACTTGCCGGGACGCTGGCGC
CATCTGCTCGACGGCCGCAAGGAGCTGCCGCCGATCTACGGCAAGCGCAGCGACGTGCAGGCGCGCTTCCTCGATGATCA
CATGAAGGTGCTCTACATCCGCAACGACACGGCAAGAAGCATCGACGAAACGCCCCTGCCGGACAAGTTGGCCGGCGTTG
TCCTCGACAAAATCGTGCCGATGCAGCCCAAGCACATCATCGTCGACCTCCGCCTGAACAATGGCGGCGACTTCTTCAAC
ACGATCCTGTTTTCCCGGGCGATACCTCGACTTGTGCCGCGCGACGGACGTGTGTTCGTGCTTGTTGGGAGAGCAACCTT
CTCTGCTGGCATAACGACCGCCGCCATGCTCAAGGGAGAGGGAGGCGACAAGGTCACCCTTATCGGCGAACCGATGGGGG
ACGGCGGCCAGTTCTGGTCCGAGGGCAAGTATGTCAAGTTGCCAAACTCCCGGATCGCTGTTCGCTACAGCCCGCAATTT
CATGACTACGAGACCGGCTGCTTCGACATCGACGACTGCTATTGGGCGACTGTCGCCTTCGGCCCGCGCGGTATTTCGAT
CGCGCCGGAAATCACGGTTGAGCTGAGTTTCAGGGCTTATGCGGAGGGGCGAGACCCTGTCCAGGAGAAAGTGCTGGACT
TGGCCGGCAGGCACTAA

Upstream 100 bases:

>100_bases
GGATTTCTTTGCGCACTCTTGTCGGAAGCCCACAAACCCAATCGTCATGATTAATGTGGCGGCGAAAACCGCCTGATGCG
AACGACAGAGGAAAGCACGT

Downstream 100 bases:

>100_bases
ACCGTCCCAGCGGTGAGCTCTCGCAGCAACCAGCGTTTGCGCTCTGAAATCCGGAAATCCTGAGTTCCGCAAATGCGGAA
TCACGATCATAAGGAAAAGG

Product: peptidase S41

Products: NA

Alternate protein names: Peptidase S

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRAEFGRHVDETASAAENLAPEE
FALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGLYIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTD
QRIRFLSPGYLVAPAVLERIGAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR
HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVPMQPKHIIVDLRLNNGGDFFN
TILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGEGGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQF
HDYETGCFDIDDCYWATVAFGPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH

Sequences:

>Translated_458_residues
MSPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRAEFGRHVDETASAAENLAPEE
FALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGLYIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTD
QRIRFLSPGYLVAPAVLERIGAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR
HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVPMQPKHIIVDLRLNNGGDFFN
TILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGEGGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQF
HDYETGCFDIDDCYWATVAFGPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH
>Mature_457_residues
SPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRAEFGRHVDETASAAENLAPEEF
ALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGLYIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTDQ
RIRFLSPGYLVAPAVLERIGAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWRH
LLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVPMQPKHIIVDLRLNNGGDFFNT
ILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGEGGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQFH
DYETGCFDIDDCYWATVAFGPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50361; Mature: 50230

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRA
CCCCCEECCCHHEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHH
EFGRHVDETASAAENLAPEEFALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGL
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCE
YIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTDQRIRFLSPGYLVAPAVLERI
EEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
GAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR
CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHH
HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVP
HHHCCHHHCCCCCCCCCCCHHHEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
MQPKHIIVDLRLNNGGDFFNTILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGE
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECC
GGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQFHDYETGCFDIDDCYWATVAF
CCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEECCCCEEEEEEE
GPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH
CCCCCEECCEEEEEEEEEEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRA
CCCCEECCCHHEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHH
EFGRHVDETASAAENLAPEEFALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGL
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCE
YIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTDQRIRFLSPGYLVAPAVLERI
EEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
GAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR
CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHH
HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVP
HHHCCHHHCCCCCCCCCCCHHHEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
MQPKHIIVDLRLNNGGDFFNTILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGE
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECC
GGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQFHDYETGCFDIDDCYWATVAF
CCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEECCCCEEEEEEE
GPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH
CCCCCEECCEEEEEEEEEEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA