| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397991
Identifier: 150397991
GI number: 150397991
Start: 2913150
End: 2914526
Strand: Direct
Name: 150397991
Synonym: Smed_2793
Alternate gene names: NA
Gene position: 2913150-2914526 (Clockwise)
Preceding gene: 150397988
Following gene: 150397994
Centisome position: 77.03
GC content: 61.0
Gene sequence:
>1377_bases ATGTCTCCAGGATGGCTCGCAATCCCTCGAACTGCCGCGATGGCCCTCACGTTAGCTGTTACCGGTTCTGCGCAGGCGGC TGATGTTATTTTGACGCCGGCCCAGATGCGAGAGGATCTTACATTCTTAGTAGAGAAATGGGCGCCGCTCGATAAAAGCT TCAGCGACAGCCAGAGGGCGGAGTTCGGCCGGCATGTCGATGAGACCGCGTCTGCGGCGGAAAATCTGGCGCCGGAAGAG TTCGCGCTTGAAGTGATGAAAGCAGTGGCCATCGCGCGCAACGGACACACCAACGCCAATGTCGGGACGTTGCTTGGCGC CGACCTTCCCGTGCGCGTGTGGACGTTTTCCGATGGGCTTTATATCGTCAAGACTCACCCCGATTTCAAACGGTTGCTTG GCGCGCGCGTCGTCGGGATCGGCTCCCTGACCACGCAGGAAGCGCTCGACCGGGTGCGTGCCTACCTTCCCGGCACGGAC CAGCGGATTCGTTTTCTCTCGCCCGGCTATCTGGTTGCGCCCGCCGTCCTCGAGCGGATCGGCGCCGTCGACGGCACGGA CCGCATTCCGTTGACCTTGCAGTTTGACGATGGACGGACGGAGATCGTCGAGCTTGCGCCTATGAAAGGCGAAGATCCCG GCGATGAGCGCAAGGCAAGCCTGAACAGGGGCTATTCCGTGCTTATTCCCGACGATCCGGACTTGCCGGGACGCTGGCGC CATCTGCTCGACGGCCGCAAGGAGCTGCCGCCGATCTACGGCAAGCGCAGCGACGTGCAGGCGCGCTTCCTCGATGATCA CATGAAGGTGCTCTACATCCGCAACGACACGGCAAGAAGCATCGACGAAACGCCCCTGCCGGACAAGTTGGCCGGCGTTG TCCTCGACAAAATCGTGCCGATGCAGCCCAAGCACATCATCGTCGACCTCCGCCTGAACAATGGCGGCGACTTCTTCAAC ACGATCCTGTTTTCCCGGGCGATACCTCGACTTGTGCCGCGCGACGGACGTGTGTTCGTGCTTGTTGGGAGAGCAACCTT CTCTGCTGGCATAACGACCGCCGCCATGCTCAAGGGAGAGGGAGGCGACAAGGTCACCCTTATCGGCGAACCGATGGGGG ACGGCGGCCAGTTCTGGTCCGAGGGCAAGTATGTCAAGTTGCCAAACTCCCGGATCGCTGTTCGCTACAGCCCGCAATTT CATGACTACGAGACCGGCTGCTTCGACATCGACGACTGCTATTGGGCGACTGTCGCCTTCGGCCCGCGCGGTATTTCGAT CGCGCCGGAAATCACGGTTGAGCTGAGTTTCAGGGCTTATGCGGAGGGGCGAGACCCTGTCCAGGAGAAAGTGCTGGACT TGGCCGGCAGGCACTAA
Upstream 100 bases:
>100_bases GGATTTCTTTGCGCACTCTTGTCGGAAGCCCACAAACCCAATCGTCATGATTAATGTGGCGGCGAAAACCGCCTGATGCG AACGACAGAGGAAAGCACGT
Downstream 100 bases:
>100_bases ACCGTCCCAGCGGTGAGCTCTCGCAGCAACCAGCGTTTGCGCTCTGAAATCCGGAAATCCTGAGTTCCGCAAATGCGGAA TCACGATCATAAGGAAAAGG
Product: peptidase S41
Products: NA
Alternate protein names: Peptidase S
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRAEFGRHVDETASAAENLAPEE FALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGLYIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTD QRIRFLSPGYLVAPAVLERIGAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVPMQPKHIIVDLRLNNGGDFFN TILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGEGGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQF HDYETGCFDIDDCYWATVAFGPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH
Sequences:
>Translated_458_residues MSPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRAEFGRHVDETASAAENLAPEE FALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGLYIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTD QRIRFLSPGYLVAPAVLERIGAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVPMQPKHIIVDLRLNNGGDFFN TILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGEGGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQF HDYETGCFDIDDCYWATVAFGPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH >Mature_457_residues SPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRAEFGRHVDETASAAENLAPEEF ALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGLYIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTDQ RIRFLSPGYLVAPAVLERIGAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWRH LLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVPMQPKHIIVDLRLNNGGDFFNT ILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGEGGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQFH DYETGCFDIDDCYWATVAFGPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50361; Mature: 50230
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRA CCCCCEECCCHHEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHH EFGRHVDETASAAENLAPEEFALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGL HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCE YIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTDQRIRFLSPGYLVAPAVLERI EEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH GAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHH HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVP HHHCCHHHCCCCCCCCCCCHHHEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC MQPKHIIVDLRLNNGGDFFNTILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGE CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECC GGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQFHDYETGCFDIDDCYWATVAF CCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEECCCCEEEEEEE GPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH CCCCCEECCEEEEEEEEEEECCCCCHHHHHHHHHCCCC >Mature Secondary Structure SPGWLAIPRTAAMALTLAVTGSAQAADVILTPAQMREDLTFLVEKWAPLDKSFSDSQRA CCCCEECCCHHEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHH EFGRHVDETASAAENLAPEEFALEVMKAVAIARNGHTNANVGTLLGADLPVRVWTFSDGL HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCE YIVKTHPDFKRLLGARVVGIGSLTTQEALDRVRAYLPGTDQRIRFLSPGYLVAPAVLERI EEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH GAVDGTDRIPLTLQFDDGRTEIVELAPMKGEDPGDERKASLNRGYSVLIPDDPDLPGRWR CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHH HLLDGRKELPPIYGKRSDVQARFLDDHMKVLYIRNDTARSIDETPLPDKLAGVVLDKIVP HHHCCHHHCCCCCCCCCCCHHHEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC MQPKHIIVDLRLNNGGDFFNTILFSRAIPRLVPRDGRVFVLVGRATFSAGITTAAMLKGE CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECC GGDKVTLIGEPMGDGGQFWSEGKYVKLPNSRIAVRYSPQFHDYETGCFDIDDCYWATVAF CCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEECCCCEEEEEEE GPRGISIAPEITVELSFRAYAEGRDPVQEKVLDLAGRH CCCCCEECCEEEEEEEEEEECCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA