| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is yajO [H]
Identifier: 150397933
GI number: 150397933
Start: 2845880
End: 2846914
Strand: Direct
Name: yajO [H]
Synonym: Smed_2735
Alternate gene names: 150397933
Gene position: 2845880-2846914 (Clockwise)
Preceding gene: 150397931
Following gene: 150397934
Centisome position: 75.25
GC content: 63.29
Gene sequence:
>1035_bases ATGGAATATAGACGGCTTGGTTCCTCCGGACTGAAAGTACCGGCCCTCAGCTTTGGTGCGGGCACATTCGGAGGCAAGGG GCCACTCTTTAGCGCCTGGGGCAGTACGGACACGGAAGAAGCCCGGCGCCTCATCGACATCTGTCTCGAGGCGGGCGTCA ATCTTTTCGACACGGCGGATGTCTATTCCGACGGCGCTTCGGAGGATGTCCTCGGAGCGGCGATCCGGGGACGGCGCGAC GACGTGATCCTGTCGACGAAACTGACGCTCCCCACGGGAGATGGGCCTAACGACGCCGGCTCGTCGCGCTCGCGCTTGAT CCGCGGTGTGGATCACGCGCTGAAGCGGCTCGGAACCGACTATATCGACCTGCTTCAGCTCCACGCCTTTGATGCGGGGA CGCCCGTCGAAGAAGTGCTGTCTACCCTCGACACGCTCGTGCGCTCCGGCAAACTGCGCTATGTCGGTGTTTCCAACTTT TCCGGTTGGCAGCTGATGAAATCGCTCGCTGTCGCCGATCGGCATGGCTATCCTCGCTACGTCGCCAACCAGGTCTACTA TTCGCTGGCCGGCCGCGACTATGAATGGGAACTGATGCCGCTCGGTCTCGATCAGGGCGTCGGCGCGCTCGTCTGGAGCC CGCTCGGTTGGGGGCGGCTCACCGGTAAGATCCGCCGTGGCGAGCCCTGGCCGCAGGGCAGCCGCCTGCACGAAACCGCC GCCTTCGGGCCGCCCGTCGATGAGGAAAAGCTATACGATATCGTTGACGTTCTCGATGCTATCGCGCAGGAAACCGGCAA AACGGTCCCGCAAATCGCCATCAACTGGCTCCTCCGGCGTCCATCCGTTTCGAGCGTCATCATCGGCGCGCGCAATGAAG AGCAGCTTCGGCAGAACCTCGGAGCGGTCGGCTGGTCGCTCTCGGCCGATGAGGTAGCCCGCCTCGACGCCGCGAGTGCG ACGACTGCTCCCTACCCCTACTTCCCCTATTTCAGGCAGGAAGGCTTTGCCCGGATCAATCCTCCGGCCGTCTGA
Upstream 100 bases:
>100_bases ATTCAGCTCACAGATAATATTCCTTTTAGCAGCCTATATCCAAAGTGCCAGAGGCTCCATCTTCGTGTAACCAGTTCATT GTCAAGAATGGAGTTGCGAA
Downstream 100 bases:
>100_bases CCGGCGGGAGATCGCCTTGGAACGCGGCCGGAACCGTCCAACGGTTTCGGCCGGCGCGGCCGCCAAGGAGCCACGCGGCA TGGCGGGCACACCAGGTGAA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MEYRRLGSSGLKVPALSFGAGTFGGKGPLFSAWGSTDTEEARRLIDICLEAGVNLFDTADVYSDGASEDVLGAAIRGRRD DVILSTKLTLPTGDGPNDAGSSRSRLIRGVDHALKRLGTDYIDLLQLHAFDAGTPVEEVLSTLDTLVRSGKLRYVGVSNF SGWQLMKSLAVADRHGYPRYVANQVYYSLAGRDYEWELMPLGLDQGVGALVWSPLGWGRLTGKIRRGEPWPQGSRLHETA AFGPPVDEEKLYDIVDVLDAIAQETGKTVPQIAINWLLRRPSVSSVIIGARNEEQLRQNLGAVGWSLSADEVARLDAASA TTAPYPYFPYFRQEGFARINPPAV
Sequences:
>Translated_344_residues MEYRRLGSSGLKVPALSFGAGTFGGKGPLFSAWGSTDTEEARRLIDICLEAGVNLFDTADVYSDGASEDVLGAAIRGRRD DVILSTKLTLPTGDGPNDAGSSRSRLIRGVDHALKRLGTDYIDLLQLHAFDAGTPVEEVLSTLDTLVRSGKLRYVGVSNF SGWQLMKSLAVADRHGYPRYVANQVYYSLAGRDYEWELMPLGLDQGVGALVWSPLGWGRLTGKIRRGEPWPQGSRLHETA AFGPPVDEEKLYDIVDVLDAIAQETGKTVPQIAINWLLRRPSVSSVIIGARNEEQLRQNLGAVGWSLSADEVARLDAASA TTAPYPYFPYFRQEGFARINPPAV >Mature_344_residues MEYRRLGSSGLKVPALSFGAGTFGGKGPLFSAWGSTDTEEARRLIDICLEAGVNLFDTADVYSDGASEDVLGAAIRGRRD DVILSTKLTLPTGDGPNDAGSSRSRLIRGVDHALKRLGTDYIDLLQLHAFDAGTPVEEVLSTLDTLVRSGKLRYVGVSNF SGWQLMKSLAVADRHGYPRYVANQVYYSLAGRDYEWELMPLGLDQGVGALVWSPLGWGRLTGKIRRGEPWPQGSRLHETA AFGPPVDEEKLYDIVDVLDAIAQETGKTVPQIAINWLLRRPSVSSVIIGARNEEQLRQNLGAVGWSLSADEVARLDAASA TTAPYPYFPYFRQEGFARINPPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=311, Percent_Identity=36.0128617363344, Blast_Score=172, Evalue=3e-43, Organism=Homo sapiens, GI27436962, Length=311, Percent_Identity=36.0128617363344, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI27436966, Length=311, Percent_Identity=35.6913183279743, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI27436969, Length=319, Percent_Identity=35.1097178683386, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI4504825, Length=317, Percent_Identity=35.0157728706625, Blast_Score=161, Evalue=8e-40, Organism=Homo sapiens, GI27436971, Length=312, Percent_Identity=31.4102564102564, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI223718702, Length=274, Percent_Identity=28.8321167883212, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI41327764, Length=274, Percent_Identity=28.8321167883212, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI41152114, Length=269, Percent_Identity=28.6245353159851, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI223718708, Length=145, Percent_Identity=32.4137931034483, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081735, Length=335, Percent_Identity=37.3134328358209, Blast_Score=225, Evalue=3e-60, Organism=Escherichia coli, GI1789375, Length=333, Percent_Identity=33.3333333333333, Blast_Score=161, Evalue=4e-41, Organism=Escherichia coli, GI1789199, Length=357, Percent_Identity=31.0924369747899, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1788070, Length=337, Percent_Identity=30.5637982195846, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788081, Length=276, Percent_Identity=29.3478260869565, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI48994888, Length=320, Percent_Identity=26.5625, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI212645785, Length=327, Percent_Identity=22.6299694189602, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17550248, Length=327, Percent_Identity=22.9357798165138, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=332, Percent_Identity=27.710843373494, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323998, Length=329, Percent_Identity=29.7872340425532, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6319958, Length=294, Percent_Identity=29.5918367346939, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6319951, Length=325, Percent_Identity=27.0769230769231, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6322615, Length=261, Percent_Identity=27.5862068965517, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321052, Length=157, Percent_Identity=32.484076433121, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24646155, Length=333, Percent_Identity=29.7297297297297, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24640980, Length=325, Percent_Identity=26.4615384615385, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI45549126, Length=325, Percent_Identity=26.4615384615385, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646159, Length=316, Percent_Identity=27.5316455696203, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24644950, Length=338, Percent_Identity=24.8520710059172, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37471; Mature: 37471
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRRLGSSGLKVPALSFGAGTFGGKGPLFSAWGSTDTEEARRLIDICLEAGVNLFDTAD CCCHHCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECHH VYSDGASEDVLGAAIRGRRDDVILSTKLTLPTGDGPNDAGSSRSRLIRGVDHALKRLGTD HHCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCH YIDLLQLHAFDAGTPVEEVLSTLDTLVRSGKLRYVGVSNFSGWQLMKSLAVADRHGYPRY HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHH VANQVYYSLAGRDYEWELMPLGLDQGVGALVWSPLGWGRLTGKIRRGEPWPQGSRLHETA HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCHHHCCEEECCCCCCCCCCHHHHH AFGPPVDEEKLYDIVDVLDAIAQETGKTVPQIAINWLLRRPSVSSVIIGARNEEQLRQNL CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH GAVGWSLSADEVARLDAASATTAPYPYFPYFRQEGFARINPPAV HHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MEYRRLGSSGLKVPALSFGAGTFGGKGPLFSAWGSTDTEEARRLIDICLEAGVNLFDTAD CCCHHCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECHH VYSDGASEDVLGAAIRGRRDDVILSTKLTLPTGDGPNDAGSSRSRLIRGVDHALKRLGTD HHCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCH YIDLLQLHAFDAGTPVEEVLSTLDTLVRSGKLRYVGVSNFSGWQLMKSLAVADRHGYPRY HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHH VANQVYYSLAGRDYEWELMPLGLDQGVGALVWSPLGWGRLTGKIRRGEPWPQGSRLHETA HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCHHHCCEEECCCCCCCCCCHHHHH AFGPPVDEEKLYDIVDVLDAIAQETGKTVPQIAINWLLRRPSVSSVIIGARNEEQLRQNL CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH GAVGWSLSADEVARLDAASATTAPYPYFPYFRQEGFARINPPAV HHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]