| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397926
Identifier: 150397926
GI number: 150397926
Start: 2839910
End: 2841139
Strand: Reverse
Name: 150397926
Synonym: Smed_2728
Alternate gene names: NA
Gene position: 2841139-2839910 (Counterclockwise)
Preceding gene: 150397927
Following gene: 150397925
Centisome position: 75.12
GC content: 61.38
Gene sequence:
>1230_bases ATGCCGCCATCCGGGAAAGGGAGATGCGACTTGATAGACATGCTGACCATCAAACGGCGGAGTTTTCTGACCGGAAGCGC CGGAGCCGTGGTTGCTGCCAGCAGCGGTGTGCTTGCGGAGGCCAAGGAGACGAAGGTTCTGCCGGACTACGTTGCGTGGA AAGACGCAAATGCTTTGATCGTCCATAGCGACAAGACCATGGAGACCAAGCGGAGCGAATTCGGCACCAGCGTCATCACG CCCGAAGAGAAGCTTTACATCCGCAACAACGTCAACACGCCGCCGGAATCGATCCTTGCTGATCGCGACGGATGGAAAGT GGAGATATCTGGCGTGAAGGAGCCCCGCACGCTTACTGTCGCCGAGTTGAAGAGCCTGGGGCTGGTGACGGCAGCGACTG TTCTGCAATGTTCAGGCAATGGCCGCAAATATTTCAAGGATCAGCTCACGGGCAACCAGAAAATGAGCGGGACGCCCTGG ACCGTCGGCGCTGCGGGCTGTGTCATCTGGAGCGGGGTGCCTCTGCGGGCCGTTGTCGACGCCCTGGGCGGCCCTGCAGA TGGCGCCCGGTTTATCACGGGAACGGGCGGTGAGGAGCTTCCGGCTGGGCTCGACCCAAAGCTTCTGGTGGTCGAACGGT CCGTCCCGATCGCAAATCTCGACAATGTGATCCTGGCATGGGAAATGAACGGAAGGCCGCTTTCCCTCGCTCATGGCGGG CCGCTGCGCATGGTCGTCCCCGGCTATTCGGGGGTCAATAACATCAAATACGTCAAGACTGTCGCTCTGACCGAGGCCGA GTCCGACGCGAAGATCCAGAAAAGCAGCTATCGCTTTCATGCGCTCGGCGAAAAAGGTTCTCCCGACCACCCCTCGGTGT GGGAACAGCCGGTGAAATCGTGGATCACCACTGCGGATGAGACCGCGAAAGCCGGACCGGTTCAGATTGCAGGCGTCGCC TTCGGCGGCATGAATGCCTGCAAGAGCGTGGAGGTCTCTCTTGATGGCGGGCAGACGTGGCAGGAAGCCGAATTCGTCGG GCCCGATCTCGGCCGGTTCGCCTGGCGCGTTTTCCTCCTGGCAGCCGATCTGGCGCCGGGGACCTACACGCTCGTCAGCC GTGCGACCGATACCGAGGGCAATGTCCAGCCCGAGGAGAGCGAAATGAATGGAGCCGGCTACGGCCACAACGGCTGGCGC GCGCCTGCGGTTACACTCACCGTTGCCTGA
Upstream 100 bases:
>100_bases CGGTCAGGATTTGGCATATCTTCGGGAAAATGTCGGGTCGAGGGAATTTTTCGGGCTGTCATTCGTCTCTTCCGTTCATT TCGAGGACGATCGGATCGGC
Downstream 100 bases:
>100_bases CTGTGCCGCAAGGGTTCCGCTGCGCTGTGTAGCGGAACCCTGTTTCACGATCTTCTTTCAGCAGTTTCGGAACAGAACAT GACCTATGTATCAGCGCGTG
Product: molybdopterin binding oxidoreductase
Products: sulfate; H2O2
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Oxidase-Like Oxidoreductase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MPPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALIVHSDKTMETKRSEFGTSVIT PEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTVAELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPW TVGAAGCVIWSGVPLRAVVDALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKSWITTADETAKAGPVQIAGVA FGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLLAADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWR APAVTLTVA
Sequences:
>Translated_409_residues MPPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALIVHSDKTMETKRSEFGTSVIT PEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTVAELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPW TVGAAGCVIWSGVPLRAVVDALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKSWITTADETAKAGPVQIAGVA FGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLLAADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWR APAVTLTVA >Mature_408_residues PPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALIVHSDKTMETKRSEFGTSVITP EEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTVAELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPWT VGAAGCVIWSGVPLRAVVDALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGGP LRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKSWITTADETAKAGPVQIAGVAF GGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLLAADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWRA PAVTLTVA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=329, Percent_Identity=32.2188449848024, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI74099702, Length=329, Percent_Identity=32.2188449848024, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI74099694, Length=329, Percent_Identity=32.2188449848024, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71992535, Length=374, Percent_Identity=30.4812834224599, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI18859905, Length=338, Percent_Identity=29.2899408284024, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.3.1
Molecular weight: Translated: 43418; Mature: 43286
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALI CCCCCCCCEEEEHHHHHHHHHEECCCCCEEEEECCCCEECCCCCCCCCCHHEECCCCEEE VHSDKTMETKRSEFGTSVITPEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTV EECCCCHHHHHHHCCCEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCEEEH AELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPWTVGAAGCVIWSGVPLRAVVD HHHHHCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCEECCCCCEEEECCCCHHHHHH ALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG HHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCC PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKS CEEEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHH WITTADETAKAGPVQIAGVAFGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLL HHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHH AADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWRAPAVTLTVA HHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure PPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALI CCCCCCCEEEEHHHHHHHHHEECCCCCEEEEECCCCEECCCCCCCCCCHHEECCCCEEE VHSDKTMETKRSEFGTSVITPEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTV EECCCCHHHHHHHCCCEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCEEEH AELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPWTVGAAGCVIWSGVPLRAVVD HHHHHCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCEECCCCCEEEECCCCHHHHHH ALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG HHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCC PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKS CEEEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHH WITTADETAKAGPVQIAGVAFGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLL HHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHH AADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWRAPAVTLTVA HHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sulfite; O2; H2O
Specific reaction: sulfite + O2 + H2O = sulfate + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA