Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397926

Identifier: 150397926

GI number: 150397926

Start: 2839910

End: 2841139

Strand: Reverse

Name: 150397926

Synonym: Smed_2728

Alternate gene names: NA

Gene position: 2841139-2839910 (Counterclockwise)

Preceding gene: 150397927

Following gene: 150397925

Centisome position: 75.12

GC content: 61.38

Gene sequence:

>1230_bases
ATGCCGCCATCCGGGAAAGGGAGATGCGACTTGATAGACATGCTGACCATCAAACGGCGGAGTTTTCTGACCGGAAGCGC
CGGAGCCGTGGTTGCTGCCAGCAGCGGTGTGCTTGCGGAGGCCAAGGAGACGAAGGTTCTGCCGGACTACGTTGCGTGGA
AAGACGCAAATGCTTTGATCGTCCATAGCGACAAGACCATGGAGACCAAGCGGAGCGAATTCGGCACCAGCGTCATCACG
CCCGAAGAGAAGCTTTACATCCGCAACAACGTCAACACGCCGCCGGAATCGATCCTTGCTGATCGCGACGGATGGAAAGT
GGAGATATCTGGCGTGAAGGAGCCCCGCACGCTTACTGTCGCCGAGTTGAAGAGCCTGGGGCTGGTGACGGCAGCGACTG
TTCTGCAATGTTCAGGCAATGGCCGCAAATATTTCAAGGATCAGCTCACGGGCAACCAGAAAATGAGCGGGACGCCCTGG
ACCGTCGGCGCTGCGGGCTGTGTCATCTGGAGCGGGGTGCCTCTGCGGGCCGTTGTCGACGCCCTGGGCGGCCCTGCAGA
TGGCGCCCGGTTTATCACGGGAACGGGCGGTGAGGAGCTTCCGGCTGGGCTCGACCCAAAGCTTCTGGTGGTCGAACGGT
CCGTCCCGATCGCAAATCTCGACAATGTGATCCTGGCATGGGAAATGAACGGAAGGCCGCTTTCCCTCGCTCATGGCGGG
CCGCTGCGCATGGTCGTCCCCGGCTATTCGGGGGTCAATAACATCAAATACGTCAAGACTGTCGCTCTGACCGAGGCCGA
GTCCGACGCGAAGATCCAGAAAAGCAGCTATCGCTTTCATGCGCTCGGCGAAAAAGGTTCTCCCGACCACCCCTCGGTGT
GGGAACAGCCGGTGAAATCGTGGATCACCACTGCGGATGAGACCGCGAAAGCCGGACCGGTTCAGATTGCAGGCGTCGCC
TTCGGCGGCATGAATGCCTGCAAGAGCGTGGAGGTCTCTCTTGATGGCGGGCAGACGTGGCAGGAAGCCGAATTCGTCGG
GCCCGATCTCGGCCGGTTCGCCTGGCGCGTTTTCCTCCTGGCAGCCGATCTGGCGCCGGGGACCTACACGCTCGTCAGCC
GTGCGACCGATACCGAGGGCAATGTCCAGCCCGAGGAGAGCGAAATGAATGGAGCCGGCTACGGCCACAACGGCTGGCGC
GCGCCTGCGGTTACACTCACCGTTGCCTGA

Upstream 100 bases:

>100_bases
CGGTCAGGATTTGGCATATCTTCGGGAAAATGTCGGGTCGAGGGAATTTTTCGGGCTGTCATTCGTCTCTTCCGTTCATT
TCGAGGACGATCGGATCGGC

Downstream 100 bases:

>100_bases
CTGTGCCGCAAGGGTTCCGCTGCGCTGTGTAGCGGAACCCTGTTTCACGATCTTCTTTCAGCAGTTTCGGAACAGAACAT
GACCTATGTATCAGCGCGTG

Product: molybdopterin binding oxidoreductase

Products: sulfate; H2O2

Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Oxidase-Like Oxidoreductase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALIVHSDKTMETKRSEFGTSVIT
PEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTVAELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPW
TVGAAGCVIWSGVPLRAVVDALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG
PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKSWITTADETAKAGPVQIAGVA
FGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLLAADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWR
APAVTLTVA

Sequences:

>Translated_409_residues
MPPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALIVHSDKTMETKRSEFGTSVIT
PEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTVAELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPW
TVGAAGCVIWSGVPLRAVVDALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG
PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKSWITTADETAKAGPVQIAGVA
FGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLLAADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWR
APAVTLTVA
>Mature_408_residues
PPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALIVHSDKTMETKRSEFGTSVITP
EEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTVAELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPWT
VGAAGCVIWSGVPLRAVVDALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGGP
LRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKSWITTADETAKAGPVQIAGVAF
GGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLLAADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWRA
PAVTLTVA

Specific function: Unknown

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI74099704, Length=329, Percent_Identity=32.2188449848024, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI74099702, Length=329, Percent_Identity=32.2188449848024, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI74099694, Length=329, Percent_Identity=32.2188449848024, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71992535, Length=374, Percent_Identity=30.4812834224599, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI18859905, Length=338, Percent_Identity=29.2899408284024, Blast_Score=122, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.8.3.1

Molecular weight: Translated: 43418; Mature: 43286

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALI
CCCCCCCCEEEEHHHHHHHHHEECCCCCEEEEECCCCEECCCCCCCCCCHHEECCCCEEE
VHSDKTMETKRSEFGTSVITPEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTV
EECCCCHHHHHHHCCCEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCEEEH
AELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPWTVGAAGCVIWSGVPLRAVVD
HHHHHCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCEECCCCCEEEECCCCHHHHHH
ALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG
HHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCC
PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKS
CEEEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHH
WITTADETAKAGPVQIAGVAFGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLL
HHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHH
AADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWRAPAVTLTVA
HHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
PPSGKGRCDLIDMLTIKRRSFLTGSAGAVVAASSGVLAEAKETKVLPDYVAWKDANALI
CCCCCCCEEEEHHHHHHHHHEECCCCCEEEEECCCCEECCCCCCCCCCHHEECCCCEEE
VHSDKTMETKRSEFGTSVITPEEKLYIRNNVNTPPESILADRDGWKVEISGVKEPRTLTV
EECCCCHHHHHHHCCCEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCEEEH
AELKSLGLVTAATVLQCSGNGRKYFKDQLTGNQKMSGTPWTVGAAGCVIWSGVPLRAVVD
HHHHHCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCEECCCCCEEEECCCCHHHHHH
ALGGPADGARFITGTGGEELPAGLDPKLLVVERSVPIANLDNVILAWEMNGRPLSLAHGG
HHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCC
PLRMVVPGYSGVNNIKYVKTVALTEAESDAKIQKSSYRFHALGEKGSPDHPSVWEQPVKS
CEEEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHH
WITTADETAKAGPVQIAGVAFGGMNACKSVEVSLDGGQTWQEAEFVGPDLGRFAWRVFLL
HHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHH
AADLAPGTYTLVSRATDTEGNVQPEESEMNGAGYGHNGWRAPAVTLTVA
HHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sulfite; O2; H2O

Specific reaction: sulfite + O2 + H2O = sulfate + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA