Click here to switch to the map view.

The map label for this gene is 150397919

Identifier: 150397919

GI number: 150397919

Start: 2835011

End: 2835397

Strand: Direct

Name: 150397919

Synonym: Smed_2721

Alternate gene names: NA

Gene position: 2835011-2835397 (Clockwise)

Preceding gene: 150397917

Following gene: 150397920

Centisome position: 74.96

GC content: 60.72

Gene sequence:

>387_bases
TTGGGGCGCGAGGCGATTCCGAAACAGGCCAGCCAACGCGGCCAGCCGCCCCTGACCCTTCGGAGGCGGGCCAATCTCAA
ACGCAATCTTCTGAACCACTCCCGCGACCCAGTGAACGGCTTGTCCAAACTGGGCAAGGAAGGAAATCTCGAAGCTGCGG
CAGCTTTGGGAGAATTCTATTTCCGCCAGGAACATCCGCTTACTTACAAGCTCTCGTTCGAATGGAACGAATGGGCAGCA
CGCAGAGGCGACGCCGGTTCTCAAGGCCGGCTGGCGACGATCTATCACGAAGGCCTTGGCGTCGAGCGCAATCCACAGCG
CGCATTCGCATTCTGGCTGCTAGCCGCAAAGCAAGGCCACTCCGGCGCGCGGGCAATGTCGGGGTAA

Upstream 100 bases:

>100_bases
TTCATAAGCGCGAGATCGGCGGCTGAGCAGGGGCGCAGCCGCTGGCTCTGGGGAATATTCGGTTTCCTGATCGGGCCCCT
TATCATGCTGTTGCCGCGCA

Downstream 100 bases:

>100_bases
GCTACGAAATGGGAATTTCGGTGCCCCAGGATCGCATAGAAGCTGGCTACTGGAGGTATCTGAGCTGTGCCGCGGGAAAT
GCGGCAGGCAATGCGGTTTA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGREAIPKQASQRGQPPLTLRRRANLKRNLLNHSRDPVNGLSKLGKEGNLEAAAALGEFYFRQEHPLTYKLSFEWNEWAA
RRGDAGSQGRLATIYHEGLGVERNPQRAFAFWLLAAKQGHSGARAMSG

Sequences:

>Translated_128_residues
MGREAIPKQASQRGQPPLTLRRRANLKRNLLNHSRDPVNGLSKLGKEGNLEAAAALGEFYFRQEHPLTYKLSFEWNEWAA
RRGDAGSQGRLATIYHEGLGVERNPQRAFAFWLLAAKQGHSGARAMSG
>Mature_127_residues
GREAIPKQASQRGQPPLTLRRRANLKRNLLNHSRDPVNGLSKLGKEGNLEAAAALGEFYFRQEHPLTYKLSFEWNEWAAR
RGDAGSQGRLATIYHEGLGVERNPQRAFAFWLLAAKQGHSGARAMSG

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14281; Mature: 14150

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREAIPKQASQRGQPPLTLRRRANLKRNLLNHSRDPVNGLSKLGKEGNLEAAAALGEFY
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHH
FRQEHPLTYKLSFEWNEWAARRGDAGSQGRLATIYHEGLGVERNPQRAFAFWLLAAKQGH
HCCCCCEEEEEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCC
SGARAMSG
CCCCCCCC
>Mature Secondary Structure 
GREAIPKQASQRGQPPLTLRRRANLKRNLLNHSRDPVNGLSKLGKEGNLEAAAALGEFY
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHH
FRQEHPLTYKLSFEWNEWAARRGDAGSQGRLATIYHEGLGVERNPQRAFAFWLLAAKQGH
HCCCCCEEEEEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCC
SGARAMSG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA