| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397907
Identifier: 150397907
GI number: 150397907
Start: 2818041
End: 2819291
Strand: Direct
Name: 150397907
Synonym: Smed_2709
Alternate gene names: NA
Gene position: 2818041-2819291 (Clockwise)
Preceding gene: 150397906
Following gene: 150397910
Centisome position: 74.51
GC content: 62.83
Gene sequence:
>1251_bases ATGATGACGACCCGATACCGGGGAAAGGGACTGCGTCTGCTGCGACTGGCTCCGGTCATGATCGGCGCAATAGCAATGAT AGCCGCCGGCCTCTTTGCCACCGCCGCCGAGGCACAGGAGCCCGTACCCCGGCGCAACGTGCTGCAAAGGCTTTTCGGTG TCTTCACGCCGCAAAGGCGCGTCTACCATCAGGACCAGTACGATTTTCGGCGTCAGCCCCGCCCGCAGCGCATACAGAAG CGCCGCCCGCAACCGTCCGAAACGCGGCAGTCGCGCCCGAGCCGGTCCAAGGCACGGCCAGTCGCGGCACCACCGCCGCC GCCAGTCGTCGTGGAGAAATCTCCCAACGCCAAAAAGGTCCTCGTCGTCGGAGACTTCGTTGCCGGAAGCCTTGGTGACG GATTGAAGGCTGCATTCGAAACAACGCCCGGCATCGTGATCGAGACGCGCGCCAACGGTTCTTCCGGCGTCGTCCGGAAC GACTATTTCGACTGGCCGAAGGCCATGTCGGACTACATCGCGGAAATCAAACCCGCCGTCATCGTCGTGAGCCTCGGCGC CAATGATCGCCAGTTGATGCGGATCGGGGAAACGCGGGAGAAATTCCGGACCAATGCCTGGATGGAGGAGTACCGCAAGC GCGTCGCCGCGCTGGCGACCCTTGCGCGGAAGGACGAACTCCCGGTCCTCTGGGTTGGAATGCCGCCCTTTCAATCGACT TCGATGACTGCCGACATGGTCACGTTCAACGGCATCTACCGCGAGGAGGTCGAGAAGGTCGGCGGACAGTTCATCGACAT CTGGGACGGTTTCGTCGACGAAGATGGCAAGTTCGTTCTGACCGGCTCGGACATCAACGGCCAGCAGGTCCGGCTAAGGG GATCGGACGGCATCAACCTGACCAAGGCCGGCAAACGCAAATTGGCTTTTTATGTCGAAAGGGATATCCGCAGGCTACTG GGCGAAGCGGCCGCAGCCACGGACGTACCGGGCGCGGAGGGCCTCAAGGATCTTGTCGTCAGCAAGCCGCTTGCCAACGA AGATATCATCAAGACGCAGCCGATCAGCCTCATCGATCCGGAACTCGACGGTGCCACCGCCCTTCTCGGCGGCGATACAC CGCTCAAGAGCACGGGCAAAAGCCCGCGCGACCGGCTCGTGGAAAAGGGCGAGGTGGTCGCCGCGCCGCCGGGGCGTATC GACGATTTCCGGCTTGCCAAACAGGGTCCGCCAGGCAGTTCCACCCGTTGA
Upstream 100 bases:
>100_bases CGCTTTTTTCCCGGTCACGGCGGTTTCCCAACAAACGGTGCCAATCGCCGTGATTTGGCGTATGCTTCCGGGATTGTCTG CATTCGGCGGTGAAATGATC
Downstream 100 bases:
>100_bases CGCGGCAGCGTCGAAGAGGAACTTGGCCGCTTATGCCGAATACGACCCCGGCCTTGTCTCTCGCCTTGATGCGCATCCTC AAGGTCGGCGCCCCACCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MMTTRYRGKGLRLLRLAPVMIGAIAMIAAGLFATAAEAQEPVPRRNVLQRLFGVFTPQRRVYHQDQYDFRRQPRPQRIQK RRPQPSETRQSRPSRSKARPVAAPPPPPVVVEKSPNAKKVLVVGDFVAGSLGDGLKAAFETTPGIVIETRANGSSGVVRN DYFDWPKAMSDYIAEIKPAVIVVSLGANDRQLMRIGETREKFRTNAWMEEYRKRVAALATLARKDELPVLWVGMPPFQST SMTADMVTFNGIYREEVEKVGGQFIDIWDGFVDEDGKFVLTGSDINGQQVRLRGSDGINLTKAGKRKLAFYVERDIRRLL GEAAAATDVPGAEGLKDLVVSKPLANEDIIKTQPISLIDPELDGATALLGGDTPLKSTGKSPRDRLVEKGEVVAAPPGRI DDFRLAKQGPPGSSTR
Sequences:
>Translated_416_residues MMTTRYRGKGLRLLRLAPVMIGAIAMIAAGLFATAAEAQEPVPRRNVLQRLFGVFTPQRRVYHQDQYDFRRQPRPQRIQK RRPQPSETRQSRPSRSKARPVAAPPPPPVVVEKSPNAKKVLVVGDFVAGSLGDGLKAAFETTPGIVIETRANGSSGVVRN DYFDWPKAMSDYIAEIKPAVIVVSLGANDRQLMRIGETREKFRTNAWMEEYRKRVAALATLARKDELPVLWVGMPPFQST SMTADMVTFNGIYREEVEKVGGQFIDIWDGFVDEDGKFVLTGSDINGQQVRLRGSDGINLTKAGKRKLAFYVERDIRRLL GEAAAATDVPGAEGLKDLVVSKPLANEDIIKTQPISLIDPELDGATALLGGDTPLKSTGKSPRDRLVEKGEVVAAPPGRI DDFRLAKQGPPGSSTR >Mature_416_residues MMTTRYRGKGLRLLRLAPVMIGAIAMIAAGLFATAAEAQEPVPRRNVLQRLFGVFTPQRRVYHQDQYDFRRQPRPQRIQK RRPQPSETRQSRPSRSKARPVAAPPPPPVVVEKSPNAKKVLVVGDFVAGSLGDGLKAAFETTPGIVIETRANGSSGVVRN DYFDWPKAMSDYIAEIKPAVIVVSLGANDRQLMRIGETREKFRTNAWMEEYRKRVAALATLARKDELPVLWVGMPPFQST SMTADMVTFNGIYREEVEKVGGQFIDIWDGFVDEDGKFVLTGSDINGQQVRLRGSDGINLTKAGKRKLAFYVERDIRRLL GEAAAATDVPGAEGLKDLVVSKPLANEDIIKTQPISLIDPELDGATALLGGDTPLKSTGKSPRDRLVEKGEVVAAPPGRI DDFRLAKQGPPGSSTR
Specific function: Unknown
COG id: COG2845
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45768; Mature: 45768
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTRYRGKGLRLLRLAPVMIGAIAMIAAGLFATAAEAQEPVPRRNVLQRLFGVFTPQRR CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH VYHQDQYDFRRQPRPQRIQKRRPQPSETRQSRPSRSKARPVAAPPPPPVVVEKSPNAKKV HHCCCCHHHHCCCCHHHHHHCCCCCHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCEE LVVGDFVAGSLGDGLKAAFETTPGIVIETRANGSSGVVRNDYFDWPKAMSDYIAEIKPAV EEEECCHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCEE IVVSLGANDRQLMRIGETREKFRTNAWMEEYRKRVAALATLARKDELPVLWVGMPPFQST EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC SMTADMVTFNGIYREEVEKVGGQFIDIWDGFVDEDGKFVLTGSDINGQQVRLRGSDGINL CCEEHHHHHCCHHHHHHHHHCCCEEEECCCEECCCCCEEEECCCCCCCEEEEECCCCCCE TKAGKRKLAFYVERDIRRLLGEAAAATDVPGAEGLKDLVVSKPLANEDIIKTQPISLIDP ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECC ELDGATALLGGDTPLKSTGKSPRDRLVEKGEVVAAPPGRIDDFRLAKQGPPGSSTR CCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MMTTRYRGKGLRLLRLAPVMIGAIAMIAAGLFATAAEAQEPVPRRNVLQRLFGVFTPQRR CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH VYHQDQYDFRRQPRPQRIQKRRPQPSETRQSRPSRSKARPVAAPPPPPVVVEKSPNAKKV HHCCCCHHHHCCCCHHHHHHCCCCCHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCEE LVVGDFVAGSLGDGLKAAFETTPGIVIETRANGSSGVVRNDYFDWPKAMSDYIAEIKPAV EEEECCHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCEE IVVSLGANDRQLMRIGETREKFRTNAWMEEYRKRVAALATLARKDELPVLWVGMPPFQST EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC SMTADMVTFNGIYREEVEKVGGQFIDIWDGFVDEDGKFVLTGSDINGQQVRLRGSDGINL CCEEHHHHHCCHHHHHHHHHCCCEEEECCCEECCCCCEEEECCCCCCCEEEEECCCCCCE TKAGKRKLAFYVERDIRRLLGEAAAATDVPGAEGLKDLVVSKPLANEDIIKTQPISLIDP ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECC ELDGATALLGGDTPLKSTGKSPRDRLVEKGEVVAAPPGRIDDFRLAKQGPPGSSTR CCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA