| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is pabB [H]
Identifier: 150397883
GI number: 150397883
Start: 2788831
End: 2789988
Strand: Direct
Name: pabB [H]
Synonym: Smed_2685
Alternate gene names: 150397883
Gene position: 2788831-2789988 (Clockwise)
Preceding gene: 150397882
Following gene: 150397884
Centisome position: 73.74
GC content: 64.34
Gene sequence:
>1158_bases ATGATCGAACACGCGCCCTATGTCCTCTTCCGGGACGACAGCGAGAACCGCACCACGGTTTTCGCCGACCCTTTGCGCGT CGTCACGGCCCGGACGAGGGCTGAGTTTCACCGCGGCCTTGGTGAAATCGAAGCGGCCCATCGTGCGGGAAAATGGATCG CGGGCTTCATGGCCTATGAAGCGGGGCATCTTTTCGAGACGAAGCTGGCCCCCTTCGCGCCGGAGAACCGGGAAACGCCG CTGATGTCATTCGGGGTCTTCGACGCGCCGGCGGAGGACCATGCGCTTGCCGTGGCGCGGCGGCGCAGCGAAAACGAACC CTTCCTCCTGGAGCCTCGCGCCGGCTGGGATTTTCCTGCTTATCGCCAGCGCTTCGAAAGGCTGCACCGGCATCTGCGCC AGGGCGATTGCTACCAGGCGAACCTGACCATGCCGATCCAAGCGCGCTGGTCCGGCGATCCGCTTGCCGCCTTCTGGTCG CTCATCGAGCGTCAGCCGGTGAGATACGGCGCACTCGTCGCCCTCGACGGCCCAGTGCTGCTGTCGCGCTCACCCGAGCT TTTCTTCCGGGTCGATGCCGAGGGCTGGATCGAAACGCACCCGATGAAGGGCACGGCGCGGCGCGGCGCGAGCCCTAAGG AAGATGATGCGATCATCGCGGCGATGCGCGCCGACGAGAAGACGCAAGCCGAAAACCGCATGATCGTCGACCTTCTGCGC AACGACATCTCCCGCGTCACCGAAGTCGGCACGCTCGACGTGCCTAAACTCTTCGATATCGAGACCTATCCGACGGTCCA TCAGATGGTGAGCCATGTCAGGGCGAAGCTTCTGACGGACATCGGCATCGCCGACATCTTCGCCGCACTCTTTCCCTGCG GCTCCGTTACCGGCGCGCCGAAGATGCGGGCCATGGAAATTCTTCACGACCTGGAGTCCGGCCCGCGCGACGCCTATTGT GGCGCGATCGGCTACATCGCGCCGGACGGGGCGATGCGCTTCAGCGTCGCGATCCGCACCATTTCCCTTTTCCCCGGGGG GGAGGCGGTGTTCAATGTCGGCGGTGGCATCGTCTTCGATTCGACGGCCGAGGCGGAATACGAAGAATGCCTGCTGAAGG CCCGTTTCGCCGTCGGCGATGCGGAGATCGCTCGATGA
Upstream 100 bases:
>100_bases ATGATTGAGGGGCTCATCGACGAACTGGAGGCGCTTGATAAGGCGTAACCCGCTCGGGCAATCAGCCCCGTCGGACCGAG TTTGACAGCGACCGACCTCA
Downstream 100 bases:
>100_bases TCGGTTTTTCCCTGATCGAGACGCTGCGCTACGAACCGGAGCATGGCTTTGCGCGGCTGCCGCTGCATCTGGCGCGGTTG ACGCGCTCCGCCAGGCGCCT
Product: aminodeoxychorismate synthase
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MIEHAPYVLFRDDSENRTTVFADPLRVVTARTRAEFHRGLGEIEAAHRAGKWIAGFMAYEAGHLFETKLAPFAPENRETP LMSFGVFDAPAEDHALAVARRRSENEPFLLEPRAGWDFPAYRQRFERLHRHLRQGDCYQANLTMPIQARWSGDPLAAFWS LIERQPVRYGALVALDGPVLLSRSPELFFRVDAEGWIETHPMKGTARRGASPKEDDAIIAAMRADEKTQAENRMIVDLLR NDISRVTEVGTLDVPKLFDIETYPTVHQMVSHVRAKLLTDIGIADIFAALFPCGSVTGAPKMRAMEILHDLESGPRDAYC GAIGYIAPDGAMRFSVAIRTISLFPGGEAVFNVGGGIVFDSTAEAEYEECLLKARFAVGDAEIAR
Sequences:
>Translated_385_residues MIEHAPYVLFRDDSENRTTVFADPLRVVTARTRAEFHRGLGEIEAAHRAGKWIAGFMAYEAGHLFETKLAPFAPENRETP LMSFGVFDAPAEDHALAVARRRSENEPFLLEPRAGWDFPAYRQRFERLHRHLRQGDCYQANLTMPIQARWSGDPLAAFWS LIERQPVRYGALVALDGPVLLSRSPELFFRVDAEGWIETHPMKGTARRGASPKEDDAIIAAMRADEKTQAENRMIVDLLR NDISRVTEVGTLDVPKLFDIETYPTVHQMVSHVRAKLLTDIGIADIFAALFPCGSVTGAPKMRAMEILHDLESGPRDAYC GAIGYIAPDGAMRFSVAIRTISLFPGGEAVFNVGGGIVFDSTAEAEYEECLLKARFAVGDAEIAR >Mature_385_residues MIEHAPYVLFRDDSENRTTVFADPLRVVTARTRAEFHRGLGEIEAAHRAGKWIAGFMAYEAGHLFETKLAPFAPENRETP LMSFGVFDAPAEDHALAVARRRSENEPFLLEPRAGWDFPAYRQRFERLHRHLRQGDCYQANLTMPIQARWSGDPLAAFWS LIERQPVRYGALVALDGPVLLSRSPELFFRVDAEGWIETHPMKGTARRGASPKEDDAIIAAMRADEKTQAENRMIVDLLR NDISRVTEVGTLDVPKLFDIETYPTVHQMVSHVRAKLLTDIGIADIFAALFPCGSVTGAPKMRAMEILHDLESGPRDAYC GAIGYIAPDGAMRFSVAIRTISLFPGGEAVFNVGGGIVFDSTAEAEYEECLLKARFAVGDAEIAR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=387, Percent_Identity=36.6925064599483, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI1787518, Length=259, Percent_Identity=31.6602316602317, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786809, Length=215, Percent_Identity=28.3720930232558, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=255, Percent_Identity=35.6862745098039, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6324361, Length=279, Percent_Identity=31.1827956989247, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 42847; Mature: 42847
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEHAPYVLFRDDSENRTTVFADPLRVVTARTRAEFHRGLGEIEAAHRAGKWIAGFMAYE CCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AGHLFETKLAPFAPENRETPLMSFGVFDAPAEDHALAVARRRSENEPFLLEPRAGWDFPA CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHH YRQRFERLHRHLRQGDCYQANLTMPIQARWSGDPLAAFWSLIERQPVRYGALVALDGPVL HHHHHHHHHHHHHCCCCEEECEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCEE LSRSPELFFRVDAEGWIETHPMKGTARRGASPKEDDAIIAAMRADEKTQAENRMIVDLLR ECCCCCEEEEECCCCCEEECCCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH NDISRVTEVGTLDVPKLFDIETYPTVHQMVSHVRAKLLTDIGIADIFAALFPCGSVTGAP HHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC KMRAMEILHDLESGPRDAYCGAIGYIAPDGAMRFSVAIRTISLFPGGEAVFNVGGGIVFD HHHHHHHHHHHHCCCCCCCCCEECEECCCCCEEEEEEEEEEEECCCCCEEEECCCCEEEC STAEAEYEECLLKARFAVGDAEIAR CCCHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MIEHAPYVLFRDDSENRTTVFADPLRVVTARTRAEFHRGLGEIEAAHRAGKWIAGFMAYE CCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AGHLFETKLAPFAPENRETPLMSFGVFDAPAEDHALAVARRRSENEPFLLEPRAGWDFPA CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHH YRQRFERLHRHLRQGDCYQANLTMPIQARWSGDPLAAFWSLIERQPVRYGALVALDGPVL HHHHHHHHHHHHHCCCCEEECEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCEE LSRSPELFFRVDAEGWIETHPMKGTARRGASPKEDDAIIAAMRADEKTQAENRMIVDLLR ECCCCCEEEEECCCCCEEECCCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH NDISRVTEVGTLDVPKLFDIETYPTVHQMVSHVRAKLLTDIGIADIFAALFPCGSVTGAP HHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC KMRAMEILHDLESGPRDAYCGAIGYIAPDGAMRFSVAIRTISLFPGGEAVFNVGGGIVFD HHHHHHHHHHHHCCCCCCCCCEECEECCCCCEEEEEEEEEEEECCCCCEEEECCCCEEEC STAEAEYEECLLKARFAVGDAEIAR CCCHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6330050; 9097040; 9278503; 7896119; 2251281; 7592344 [H]