Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150397877

Identifier: 150397877

GI number: 150397877

Start: 2781066

End: 2781371

Strand: Direct

Name: 150397877

Synonym: Smed_2679

Alternate gene names: NA

Gene position: 2781066-2781371 (Clockwise)

Preceding gene: 150397876

Following gene: 150397878

Centisome position: 73.54

GC content: 61.11

Gene sequence:

>306_bases
ATGACCGAGCTCACCCCGAACCAAAGCACCGCATTCGAGGCAGCGGCCTTTCGCCGGCTGCTCGAGCATCTGCGCGAACG
CAGCGACGTTCAGAACATCGATCTGATGAACCTTGCCGGCTTCTGCCGCAATTGCCTGTCGAACTGGTATCGCGAAGCGG
CGGAAGCCTCAGGCGTGACGATGAGCAAGGACGAATCCCGCGAGATCGTCTACGGCATGCCCTATGACGAATGGCGGGCT
CGGAACCAGAAAGAGGCTTCCGCCGAGCAGAATGCCGCGTTCGAGCGCAACCGGCCCAAGGAATAG

Upstream 100 bases:

>100_bases
ATCCTTGCGGAGCTCAACGACCTGCCGGAGCTCCACGTCTATCAACGTCACCCGTCGCGCACGGGCGCCTATGAAAACTG
ACGAAGAGGAGACGAAGCCC

Downstream 100 bases:

>100_bases
GAGTTGGAGGAAATGCCTGTGTTGTTGCGCAATCGCCCTTGACCTCGGCGGCCGTTCACGGCAGGTCACAGCACCCGGAA
AATTCATCCCATAAGGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTELTPNQSTAFEAAAFRRLLEHLRERSDVQNIDLMNLAGFCRNCLSNWYREAAEASGVTMSKDESREIVYGMPYDEWRA
RNQKEASAEQNAAFERNRPKE

Sequences:

>Translated_101_residues
MTELTPNQSTAFEAAAFRRLLEHLRERSDVQNIDLMNLAGFCRNCLSNWYREAAEASGVTMSKDESREIVYGMPYDEWRA
RNQKEASAEQNAAFERNRPKE
>Mature_100_residues
TELTPNQSTAFEAAAFRRLLEHLRERSDVQNIDLMNLAGFCRNCLSNWYREAAEASGVTMSKDESREIVYGMPYDEWRAR
NQKEASAEQNAAFERNRPKE

Specific function: Unknown

COG id: COG3492

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11720; Mature: 11589

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELTPNQSTAFEAAAFRRLLEHLRERSDVQNIDLMNLAGFCRNCLSNWYREAAEASGVT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
MSKDESREIVYGMPYDEWRARNQKEASAEQNAAFERNRPKE
CCCCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TELTPNQSTAFEAAAFRRLLEHLRERSDVQNIDLMNLAGFCRNCLSNWYREAAEASGVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
MSKDESREIVYGMPYDEWRARNQKEASAEQNAAFERNRPKE
CCCCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA