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The map label for this gene is 150397873

Identifier: 150397873

GI number: 150397873

Start: 2777296

End: 2777907

Strand: Direct

Name: 150397873

Synonym: Smed_2675

Alternate gene names: NA

Gene position: 2777296-2777907 (Clockwise)

Preceding gene: 150397872

Following gene: 150397876

Centisome position: 73.44

GC content: 61.93

Gene sequence:

>612_bases
ATGCCCGCCATGCGCGTTTTCTCGAACTTGATTCTGGCATGTCTTGCCATGTGCGCCACGACAGTGGACAGCACGCCGCT
TGTGGCGGCAGAGCCCTCGCCTCAAACAGAGGTCGCGGCCCTCACCACTCCAAAAGAGCGCGTCGACGCACTCTTCACCG
ATCTCAAGAGGGAAGTCGAGGAGGACAAGGCCCGTCAGGTCGCCGAACGCATTCGCCTCGAATGGCAGGATTCCGGCAGC
GCGACCGTGAACCTTCTGATGCAATGGGCCAACAAGGCGATCGCCGAGGAGAAGCAGACGGCGGCGCTCGATCTTCTCGA
CCAGGTGATCGCCCTTTCGCCCGACTATGTCGAAGGCTGGAACCGTCGCGCCACGCTTCATTACCAGATGGGCAACTTTC
GCAAGTCGATGTCCGACATCAACCGCGTGCTCGCCTTGGAGCCTCGCCATTTCGGCGCACTCGCCGGCATGGCCACCATG
TTGGAGGCTGCCGGCAAGGAAGAGCTCGCCATGCGTGCATGGCAGCAATTCCTCGACGTCTATCCGTCCGACCGGAAGGC
GCAGGAGCAGCTTGGCGAATTGGCAGAAAAGCTCGCCGGCAGCCGGACGTGA

Upstream 100 bases:

>100_bases
CAGGGCTGATGTCCTGCGGCGGCAATTGCCGCCTGCGCCTTGATGGGGTCACTCGCTGATTTCCTAAAATTGATTTGATC
TTGTTTCATGGCGGGCTACG

Downstream 100 bases:

>100_bases
CCGGTACGCGTCGACGAATGCCCCTCAGCCGGCCTGATCGAGTCCCTCTCGCGGCTCGCGGCGTGCCGGACACATGCGCG
GAGAGAAATCAGCACCTCAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MPAMRVFSNLILACLAMCATTVDSTPLVAAEPSPQTEVAALTTPKERVDALFTDLKREVEEDKARQVAERIRLEWQDSGS
ATVNLLMQWANKAIAEEKQTAALDLLDQVIALSPDYVEGWNRRATLHYQMGNFRKSMSDINRVLALEPRHFGALAGMATM
LEAAGKEELAMRAWQQFLDVYPSDRKAQEQLGELAEKLAGSRT

Sequences:

>Translated_203_residues
MPAMRVFSNLILACLAMCATTVDSTPLVAAEPSPQTEVAALTTPKERVDALFTDLKREVEEDKARQVAERIRLEWQDSGS
ATVNLLMQWANKAIAEEKQTAALDLLDQVIALSPDYVEGWNRRATLHYQMGNFRKSMSDINRVLALEPRHFGALAGMATM
LEAAGKEELAMRAWQQFLDVYPSDRKAQEQLGELAEKLAGSRT
>Mature_202_residues
PAMRVFSNLILACLAMCATTVDSTPLVAAEPSPQTEVAALTTPKERVDALFTDLKREVEEDKARQVAERIRLEWQDSGSA
TVNLLMQWANKAIAEEKQTAALDLLDQVIALSPDYVEGWNRRATLHYQMGNFRKSMSDINRVLALEPRHFGALAGMATML
EAAGKEELAMRAWQQFLDVYPSDRKAQEQLGELAEKLAGSRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22595; Mature: 22464

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMRVFSNLILACLAMCATTVDSTPLVAAEPSPQTEVAALTTPKERVDALFTDLKREVE
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHH
EDKARQVAERIRLEWQDSGSATVNLLMQWANKAIAEEKQTAALDLLDQVIALSPDYVEGW
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
NRRATLHYQMGNFRKSMSDINRVLALEPRHFGALAGMATMLEAAGKEELAMRAWQQFLDV
CCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
YPSDRKAQEQLGELAEKLAGSRT
CCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PAMRVFSNLILACLAMCATTVDSTPLVAAEPSPQTEVAALTTPKERVDALFTDLKREVE
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHH
EDKARQVAERIRLEWQDSGSATVNLLMQWANKAIAEEKQTAALDLLDQVIALSPDYVEGW
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
NRRATLHYQMGNFRKSMSDINRVLALEPRHFGALAGMATMLEAAGKEELAMRAWQQFLDV
CCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
YPSDRKAQEQLGELAEKLAGSRT
CCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA