The gene/protein map for NC_003212 is currently unavailable.
Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is cya3 [H]

Identifier: 150397854

GI number: 150397854

Start: 2760546

End: 2762450

Strand: Reverse

Name: cya3 [H]

Synonym: Smed_2656

Alternate gene names: 150397854

Gene position: 2762450-2760546 (Counterclockwise)

Preceding gene: 150397855

Following gene: 150397847

Centisome position: 73.04

GC content: 61.52

Gene sequence:

>1905_bases
GTGCTCGGCTACAAGATGAAATTCGAGGCTCTGTTGGAACGCCGTCTCACTGCCATTCTCGCCGCCGATGTGGTGGGCTA
TAGCCGCCTGATGGGTGCGGATGAGGCCGGCACGCTCGCGGCGCTGAAGCGGCATCGACGCGAGTTGCTGGAGCCGAAGA
TCGCCGAGCACAAGGGCCGCATCGTCAAGCTGGCGGGAGACAGCTTCCTGGTAGAATTTTCGAGCGTTGTGAACGCGGTC
GCCTGCGCCGTCGCAATCCAGCGCGGCATGGTTTCCTGCAACGAAGGTCTGCCGAAAAGCAGGCGTATCGAACTCAGGAT
CGGCATCCATCTCGGCGACGTGATCGTTGAGGACGGCGACATCTTCGGCGATGGCGTCAACGTCGCTGCGCGGCTCGAAG
GGCTTGCCGACCCGTCCGGCATCGCCGTTTCGGCCTCCGTGCGCGACCATGTCGGCTCGAGACTCGATGTCGGCTTCGTC
GACAAGGGCGAATACAGTCTGAAGAACATCGCGCCGACAATTCGCGTCTACACGGTTTCTCTCGGCGCGCATCCGGTCGC
AAAGGGTTCGGAACCGGCCGGTGTCGTTGACCGTGGCTACGAATTGTCCATCGCCGTCCTGCCCTTCACCAATATGAGCC
ATGATCCCGAGCAGGAATACTTCTCCGACGGCATCACCGAGGACGTCATCACCGATCTTTCGAAGGTTGCGCGGCTGCAC
GTCGTCGCCCGCAACACCGTCTTCACCTACAAGGGCAAGGCAGTGAAGGTGAAACAGATCGCCCACGAACTCGGCGTGCG
CTTCATTCTCGAAGGTAGCGTACGCAAGGCGGGCGAACGCGTGCGCATCACCGGCCAGCTGATCGACGCCCAGACCGGCG
GGCATCTGTGGGCGGACCGTTACGATCGCGACCTGACCGACATTTTCGCGATCCAGGACGAGATCACGCACGCGATCGTC
AACCAGCTCAAGATAAAGCTCCTGCCGGAGGAAAAGAAGGCGATCGAAAGCGATCCCACGACTTCCGTCGAGGCCTATAC
CTACTATCTCCGGGGACGCCAGTTCTCACATACCTGGACAAAGCCCTATCTGCTTCTCGCCCGCCGGATGTTCCTCAAGG
CTGTCGAGCTCGATCCGAACTACGCTCGTGCCTATGCGGGAATCGCCGAATGCGAATGTGCGATCAGGGACTGGCACGAA
AAGGAGTTCCCGCTGAAGAGCATTCTCGACATGAGCGCCAAGGCGCTCGCGCTGGATCCGAATCTGGCGGAAGCGCACGC
CTCGCGCGGGCTTGCATTGAACCACGACGGCCAAACGGAGGAAGCGAGCCGTGAGTTCCGTCAGGCTCTCGCGCTGGATC
CTTCGCTCTATGAGGCAAATCTCTATTATGGCCGTTTCCTGTTCGCGCAGGGTCGATTCCAGGAAGCAATCGGCTTTTTC
GAGCGCGCGGCGGAGATCAGGTCGGACGACTATTTTTCGCCGATCCATCTGATGGGTTGCCATCTCTCGCTCGGTAGGGA
AGCCGAGCGCCAGCGTTGGGCACGGATCGGCATCGAGCGGGCGACAAGAGCGCTGGAGCGGAATCCGGAAAATGCCAGTC
CGGCCCATCGCGGCGCATTGGCGCTCGCGCATATGGGTGAGGCCGAACGCGCGAAGGAATGGGTTTCCCGAGCACTTGCG
ACCGATCCCGACGATGTGGTCGCGCAGTACAATGCAGCATGCGTCTATGCGCTCCTCGGTGAGGGCGAGCGTGCGCTGGA
GCTGCTGGAGACAGTGGTGCCGCAGAGCTCCAGCTATCATGTCCTATGGTTCAATCAGGACCCGGACCTGGATCTCATAC
GCGACGATCCCCGCTTCCGCGCGCTCCTCGACGCGCTCGGAGACTGCAACGCCGCAGGGCCCTGA

Upstream 100 bases:

>100_bases
TTCCTTTAGAAACAGCACCTTGCGGAACGGCCACTTATCTTCACGGCCAAAACGACGCGAGTCTCCGCACGACATTATGG
CAGGAAAAGGTTAAATTACC

Downstream 100 bases:

>100_bases
CGAGCGACCGCCTCTGCGCGTCCGAAGGACTCCCGGGGTGCTGCGAACATCAGACCTCGATCACGCCGCGCATCGCCGTC
ACGCAGTCGCCCGAGATGCT

Product: adenylyl cyclase class-3/4/guanylyl cyclase

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGRIVKLAGDSFLVEFSSVVNAV
ACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGDIFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFV
DKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH
VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITHAIV
NQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHE
KEFPLKSILDMSAKALALDPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF
ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALA
TDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYHVLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP

Sequences:

>Translated_634_residues
MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGRIVKLAGDSFLVEFSSVVNAV
ACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGDIFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFV
DKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH
VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITHAIV
NQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHE
KEFPLKSILDMSAKALALDPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF
ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALA
TDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYHVLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP
>Mature_634_residues
MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGRIVKLAGDSFLVEFSSVVNAV
ACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGDIFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFV
DKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH
VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITHAIV
NQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHE
KEFPLKSILDMSAKALALDPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF
ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALA
TDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYHVLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 70220; Mature: 70220

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC
IVKLAGDSFLVEFSSVVNAVACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGD
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEECCEEEECCC
IFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFVDKGEYSLKNIAPTIRVYTVS
EECCCCCHHHHHCCCCCCCCEEEEEEHHHHCCCCCCCCEECCCCCCHHHCCCEEEEEEEE
LGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH
ECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADR
EEEECEEEEECCCEEEHHHHHHHCCCEEEEECCHHCCCCEEEEEEEEEECCCCCCEEHHH
YDRDLTDIFAIQDEITHAIVNQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWT
HCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
KPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAKALALDP
HHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECC
NLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF
CHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCEECCEEEEEEEEECCHHHHHHHHH
ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGAL
HHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ALAHMGEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYH
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
VLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP
EEEECCCCCCCEECCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC
IVKLAGDSFLVEFSSVVNAVACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGD
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEECCEEEECCC
IFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFVDKGEYSLKNIAPTIRVYTVS
EECCCCCHHHHHCCCCCCCCEEEEEEHHHHCCCCCCCCEECCCCCCHHHCCCEEEEEEEE
LGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH
ECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADR
EEEECEEEEECCCEEEHHHHHHHCCCEEEEECCHHCCCCEEEEEEEEEECCCCCCEEHHH
YDRDLTDIFAIQDEITHAIVNQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWT
HCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
KPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAKALALDP
HHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECC
NLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF
CHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCEECCEEEEEEEEECCHHHHHHHHH
ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGAL
HHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ALAHMGEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYH
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
VLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP
EEEECCCCCCCEECCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]