| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397802
Identifier: 150397802
GI number: 150397802
Start: 2701219
End: 2701569
Strand: Reverse
Name: 150397802
Synonym: Smed_2604
Alternate gene names: NA
Gene position: 2701569-2701219 (Counterclockwise)
Preceding gene: 150397805
Following gene: 150397799
Centisome position: 71.43
GC content: 57.55
Gene sequence:
>351_bases ATGAAAGCACGTGAGAGCCTTGTTCGCCTGAAGGAATTTCAGGTTCGGGAAAAGCAGCGTCAGCTCGGCCAGCTTCAGAT GATGATGGCCGAGTTCGAGCGCATGACCAAGGATCTGGAAAACCAGATCGTTTTTGAGGAGAAGAAGTCGGGGATCTCCG ACCCTTCGCACTTCGCTTACCCTACCTTCGCCAAGGCTGCTCGTCAGAGGGCCGACAATCTTCAGGTTTCAATCCGTGAA CTGAAGATGCAGCAGGATGCGGCCGAACTCGCGCTTGAGGAGGTCCAGGCGGAATATGCGAGGGCAGCAGCACTCGAGGA GCGGGACACGGGCACGCGTCTGCGCGCCTGA
Upstream 100 bases:
>100_bases AAGGAGTTAGAGCGGGGTGCGGACGGAGATCCGCTTCACACCTTACTCATCCCGCTCGGGAACAGTAACCGGGGTCTCGG TATCCACGGGAGTATTGCGT
Downstream 100 bases:
>100_bases CAAAACAGCCACAGCGACGGCACTGCGCGTCCGATGAGACGCGCAGTGCCGTCGCGGTGGCTTTTCTGTTCTTTCAGGCT TCTTCCAGCGCTTTCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Flagellar Export FliJ; Flagelar FliJ Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKARESLVRLKEFQVREKQRQLGQLQMMMAEFERMTKDLENQIVFEEKKSGISDPSHFAYPTFAKAARQRADNLQVSIRE LKMQQDAAELALEEVQAEYARAAALEERDTGTRLRA
Sequences:
>Translated_116_residues MKARESLVRLKEFQVREKQRQLGQLQMMMAEFERMTKDLENQIVFEEKKSGISDPSHFAYPTFAKAARQRADNLQVSIRE LKMQQDAAELALEEVQAEYARAAALEERDTGTRLRA >Mature_116_residues MKARESLVRLKEFQVREKQRQLGQLQMMMAEFERMTKDLENQIVFEEKKSGISDPSHFAYPTFAKAARQRADNLQVSIRE LKMQQDAAELALEEVQAEYARAAALEERDTGTRLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13477; Mature: 13477
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARESLVRLKEFQVREKQRQLGQLQMMMAEFERMTKDLENQIVFEEKKSGISDPSHFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PTFAKAARQRADNLQVSIRELKMQQDAAELALEEVQAEYARAAALEERDTGTRLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKARESLVRLKEFQVREKQRQLGQLQMMMAEFERMTKDLENQIVFEEKKSGISDPSHFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PTFAKAARQRADNLQVSIRELKMQQDAAELALEEVQAEYARAAALEERDTGTRLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA