Click here to switch to the map view.

The map label for this gene is 150397753

Identifier: 150397753

GI number: 150397753

Start: 2652630

End: 2653406

Strand: Reverse

Name: 150397753

Synonym: Smed_2555

Alternate gene names: NA

Gene position: 2653406-2652630 (Counterclockwise)

Preceding gene: 150397756

Following gene: 150397752

Centisome position: 70.16

GC content: 59.72

Gene sequence:

>777_bases
ATGAAGTTGTGCATTGGATTTCGCGCGCCGGCACTCCTGGCCGCCATGATGTTTTCCACAGCTCCGCTCGCTGCGGAGGT
GTCGCATCAGACGGATTACAGTATCAGGCTTGCCGGCCTGCCTCTGGCGCGCGCATCGTTCCACACCGAGGTCGAAAAGA
ATCGCTACACGATCTCCGGAACGCTGAATTCCTCAGGGCTCGCGGATATCATCAGCCACACGACCGGGCAGACTCGCGTC
TCGGGGGTGATCGACCGAGATCATCTACGGGCCAGCGAATATTCCATGTCCTATCGTAGTGGGCGGAAGGGCCGGGCCAT
CAATGTGAGTTTTCGCAACGGCAATGTCGTGCGATCAAGCATGGTCCCGAAGCGTAGCCCTTTGCCAAAGAACTGGGTGC
CGGTCACCAGCCGGGATATGCGAAACGTGCTGGATCCGCTCTCGGGCCTGATCATCCCGGCCAAGGCCCGGGTCTGCCCC
AACACCCTGCCGATCTTCGATGGCGAATCGCGACTCGACATAAGGCTTTCGCCGAAGGGGACTAGAAACTTCAAAACGAG
GGGATTCGAGGGGGAGGTCATCGTCTGCGGCATCCGCTTCGTGCCGAAGGCCGGATATCGTAAAGGACGCGAGGACGTCG
AATATCTGCGCCGCCTGGGAACCATGGAGATCTGGTATGCGAAAGCGAACGGCGTAGACGTCTATGCGCCGGTCTATGCG
CGCATACCGACGAAGATTGGCCCTGTCACGGTGTCGGCGACGCGATTCGGCGATTGA

Upstream 100 bases:

>100_bases
GGAAACGTCGAGTCGCTGCAACACTGTGAACTGCTGCATGGATCCGTTTCGAGCCATTCCGGTATCGGGGACCATGCACG
AGAGAATGGGGCTTTCGGGC

Downstream 100 bases:

>100_bases
GGCCCGCGGGGGTGCGATCCGCCTTGTCCACCTGTGGCGCCCCTTTCGACAATCCAGGAAGCGCGATAGATCAGTGAAAG
TTGCGATCGAGCTATCGGCG

Product: putative signal peptide protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKLCIGFRAPALLAAMMFSTAPLAAEVSHQTDYSIRLAGLPLARASFHTEVEKNRYTISGTLNSSGLADIISHTTGQTRV
SGVIDRDHLRASEYSMSYRSGRKGRAINVSFRNGNVVRSSMVPKRSPLPKNWVPVTSRDMRNVLDPLSGLIIPAKARVCP
NTLPIFDGESRLDIRLSPKGTRNFKTRGFEGEVIVCGIRFVPKAGYRKGREDVEYLRRLGTMEIWYAKANGVDVYAPVYA
RIPTKIGPVTVSATRFGD

Sequences:

>Translated_258_residues
MKLCIGFRAPALLAAMMFSTAPLAAEVSHQTDYSIRLAGLPLARASFHTEVEKNRYTISGTLNSSGLADIISHTTGQTRV
SGVIDRDHLRASEYSMSYRSGRKGRAINVSFRNGNVVRSSMVPKRSPLPKNWVPVTSRDMRNVLDPLSGLIIPAKARVCP
NTLPIFDGESRLDIRLSPKGTRNFKTRGFEGEVIVCGIRFVPKAGYRKGREDVEYLRRLGTMEIWYAKANGVDVYAPVYA
RIPTKIGPVTVSATRFGD
>Mature_258_residues
MKLCIGFRAPALLAAMMFSTAPLAAEVSHQTDYSIRLAGLPLARASFHTEVEKNRYTISGTLNSSGLADIISHTTGQTRV
SGVIDRDHLRASEYSMSYRSGRKGRAINVSFRNGNVVRSSMVPKRSPLPKNWVPVTSRDMRNVLDPLSGLIIPAKARVCP
NTLPIFDGESRLDIRLSPKGTRNFKTRGFEGEVIVCGIRFVPKAGYRKGREDVEYLRRLGTMEIWYAKANGVDVYAPVYA
RIPTKIGPVTVSATRFGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28490; Mature: 28490

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLCIGFRAPALLAAMMFSTAPLAAEVSHQTDYSIRLAGLPLARASFHTEVEKNRYTISG
CEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEE
TLNSSGLADIISHTTGQTRVSGVIDRDHLRASEYSMSYRSGRKGRAINVSFRNGNVVRSS
ECCCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECC
MVPKRSPLPKNWVPVTSRDMRNVLDPLSGLIIPAKARVCPNTLPIFDGESRLDIRLSPKG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEECCCCEEEEEECCCC
TRNFKTRGFEGEVIVCGIRFVPKAGYRKGREDVEYLRRLGTMEIWYAKANGVDVYAPVYA
CCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCEEEEECHHE
RIPTKIGPVTVSATRFGD
ECCCCCCCEEEEEECCCC
>Mature Secondary Structure
MKLCIGFRAPALLAAMMFSTAPLAAEVSHQTDYSIRLAGLPLARASFHTEVEKNRYTISG
CEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEE
TLNSSGLADIISHTTGQTRVSGVIDRDHLRASEYSMSYRSGRKGRAINVSFRNGNVVRSS
ECCCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECC
MVPKRSPLPKNWVPVTSRDMRNVLDPLSGLIIPAKARVCPNTLPIFDGESRLDIRLSPKG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEECCCCEEEEEECCCC
TRNFKTRGFEGEVIVCGIRFVPKAGYRKGREDVEYLRRLGTMEIWYAKANGVDVYAPVYA
CCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCEEEEECHHE
RIPTKIGPVTVSATRFGD
ECCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA