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The map label for this gene is 150397613

Identifier: 150397613

GI number: 150397613

Start: 2489381

End: 2490226

Strand: Reverse

Name: 150397613

Synonym: Smed_2413

Alternate gene names: NA

Gene position: 2490226-2489381 (Counterclockwise)

Preceding gene: 150397614

Following gene: 150397610

Centisome position: 65.85

GC content: 67.85

Gene sequence:

>846_bases
ATGGCCGCGCTCATTCTCGGCGGCGCGGCGATCGGCGGGTCGCCGATCTTCGTGCGGCTCTCGGAAGCGGGGCCGATGGC
GACAGCTTTCTGGCGCGTGGCGTTGGCGTTGATCCCGCTGGTCGCCTGGTCTCAACTTCGCAACGGAACGGCCGGCGACA
GGTCCCCCAAGGGCTTGTCCGATTTCATCGCGCTCGCCCTGCCGGGTGTGTTTCTCGCCGTCGATCTCGGTGCCTGGCAC
CTCGCGCTGACCATGACCTCGGTTGCCAATGCGACGTTGCTTGCCAATCTGGCGCCGGTCTTCCTGACGCTGGCGGGGTG
GGCGCTGTTTCGCTCCGCCGTCAGCGGCATCTTCGTGGCTGGCCTCGCCACGGCTATCGCCGGCGTTGTCGTCCTGAAGG
GCGGTCCGGCTGCACTCGGCGGCGGCGATCTCGCCGGCGATGGCATCGCCATCGTCGCGGCCGCCTTCTACGCCGGATAC
ATTCTCGCCATCGGACGCCTGCGAAGCCGTTTCAGCACCAACCGGATCATGATCTGGAGCACCGCATCGGCAGCCGTCTG
CATGCTGCCGATGGCCTTGCTCACGGAGCAGGCGCTCCTCCCGCTGACCGCCTTCGGCTGGGCCATGCTCTTCGGTCTTG
CCTTTGTCAGCCACGCCGGCGGCCAGGTGGCGATCACCTACGCCCTCGCTTTTCTGCCGCCGGCCTTTTCTTCGCTGACG
CTGCTTCTGCAGCCGGTCGTGGCTGCGCTGCTCGCCTGGGTCCTGCTGAGCGAACCGGTGGGCATCATGCAGGCGATCGG
CGGGGCGATCGTGCTGGCCGGAATCCTGATCGCCCGGCGCGGTTGA

Upstream 100 bases:

>100_bases
GCTCGCTTGCCGCGTCATCGTTTCTGTGGCGCTGCCCCATCCACCGGACATCGCCGTGACCCAAGCCGTCAGTTCCGCCG
CTTCCCATAACCGACTAGCC

Downstream 100 bases:

>100_bases
TTCCGGGAAGAGTGCACAACGGCTTCCATCCGGAATTGAGGAAAACAAGAGGGAGCAACTCAACGCATCCTGCTCTCGAT
TTTGGAACCACTCAGATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAALILGGAAIGGSPIFVRLSEAGPMATAFWRVALALIPLVAWSQLRNGTAGDRSPKGLSDFIALALPGVFLAVDLGAWH
LALTMTSVANATLLANLAPVFLTLAGWALFRSAVSGIFVAGLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGY
ILAIGRLRSRFSTNRIMIWSTASAAVCMLPMALLTEQALLPLTAFGWAMLFGLAFVSHAGGQVAITYALAFLPPAFSSLT
LLLQPVVAALLAWVLLSEPVGIMQAIGGAIVLAGILIARRG

Sequences:

>Translated_281_residues
MAALILGGAAIGGSPIFVRLSEAGPMATAFWRVALALIPLVAWSQLRNGTAGDRSPKGLSDFIALALPGVFLAVDLGAWH
LALTMTSVANATLLANLAPVFLTLAGWALFRSAVSGIFVAGLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGY
ILAIGRLRSRFSTNRIMIWSTASAAVCMLPMALLTEQALLPLTAFGWAMLFGLAFVSHAGGQVAITYALAFLPPAFSSLT
LLLQPVVAALLAWVLLSEPVGIMQAIGGAIVLAGILIARRG
>Mature_280_residues
AALILGGAAIGGSPIFVRLSEAGPMATAFWRVALALIPLVAWSQLRNGTAGDRSPKGLSDFIALALPGVFLAVDLGAWHL
ALTMTSVANATLLANLAPVFLTLAGWALFRSAVSGIFVAGLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGYI
LAIGRLRSRFSTNRIMIWSTASAAVCMLPMALLTEQALLPLTAFGWAMLFGLAFVSHAGGQVAITYALAFLPPAFSSLTL
LLQPVVAALLAWVLLSEPVGIMQAIGGAIVLAGILIARRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 28546; Mature: 28415

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALILGGAAIGGSPIFVRLSEAGPMATAFWRVALALIPLVAWSQLRNGTAGDRSPKGLS
CCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DFIALALPGVFLAVDLGAWHLALTMTSVANATLLANLAPVFLTLAGWALFRSAVSGIFVA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGYILAIGRLRSRFSTNRIMIWS
HHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
TASAAVCMLPMALLTEQALLPLTAFGWAMLFGLAFVSHAGGQVAITYALAFLPPAFSSLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHH
LLLQPVVAALLAWVLLSEPVGIMQAIGGAIVLAGILIARRG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AALILGGAAIGGSPIFVRLSEAGPMATAFWRVALALIPLVAWSQLRNGTAGDRSPKGLS
CEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DFIALALPGVFLAVDLGAWHLALTMTSVANATLLANLAPVFLTLAGWALFRSAVSGIFVA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGYILAIGRLRSRFSTNRIMIWS
HHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
TASAAVCMLPMALLTEQALLPLTAFGWAMLFGLAFVSHAGGQVAITYALAFLPPAFSSLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHH
LLLQPVVAALLAWVLLSEPVGIMQAIGGAIVLAGILIARRG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]