| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397587
Identifier: 150397587
GI number: 150397587
Start: 2464305
End: 2464559
Strand: Reverse
Name: 150397587
Synonym: Smed_2387
Alternate gene names: NA
Gene position: 2464559-2464305 (Counterclockwise)
Preceding gene: 150397588
Following gene: 150397586
Centisome position: 65.17
GC content: 65.1
Gene sequence:
>255_bases ATGCTGAGCCTGCGTCCGAACTGCGAATGTTGCGATCGGGACCTGCCGCCCGACAGCCGCGATGCGATGATCTGCACCTT CGAATGCAGTTTTTGCACCGACTGCGCCGAGGCGAAGCTTGGCGGGGCCTGCCCGAATTGCGGCGGCGAGTTGGTCCGGC GCCCGTTGCGCCCTGCGGCAATGCTGAAGAAATATCCGGCATCGACGGAGCGCGTCTTGAAGCCCGGGGGCTGTGCGCCT CGGCAAGCTGCTTGA
Upstream 100 bases:
>100_bases GCGGAGATGATCCACGACATCCAGATCGAGGCGACGTTTCCTGATGGAACGAAGCTCGTCACGGTTCACGAGCCGATCCG TTAGATGATGGGAGGCCACG
Downstream 100 bases:
>100_bases GGAGAAGACGATGATCCCGGGTGAAATCATCACCGCCGCCGGTGAGATCGAGTTGAATGCCGGTCTCGAGACCGTCACCA TCGAAGTTGCCAATTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAAMLKKYPASTERVLKPGGCAP RQAA
Sequences:
>Translated_84_residues MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAAMLKKYPASTERVLKPGGCAP RQAA >Mature_84_residues MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAAMLKKYPASTERVLKPGGCAP RQAA
Specific function: Unknown
COG id: COG3813
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010696 - InterPro: IPR013083 [H]
Pfam domain/function: PF06906 DUF1272 [H]
EC number: NA
Molecular weight: Translated: 9036; Mature: 9036
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 15.5 %Cys+Met (Translated Protein) 11.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 15.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAA CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHH MLKKYPASTERVLKPGGCAPRQAA HHHHCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAA CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHH MLKKYPASTERVLKPGGCAPRQAA HHHHCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8121412; 11481430 [H]