Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397587

Identifier: 150397587

GI number: 150397587

Start: 2464305

End: 2464559

Strand: Reverse

Name: 150397587

Synonym: Smed_2387

Alternate gene names: NA

Gene position: 2464559-2464305 (Counterclockwise)

Preceding gene: 150397588

Following gene: 150397586

Centisome position: 65.17

GC content: 65.1

Gene sequence:

>255_bases
ATGCTGAGCCTGCGTCCGAACTGCGAATGTTGCGATCGGGACCTGCCGCCCGACAGCCGCGATGCGATGATCTGCACCTT
CGAATGCAGTTTTTGCACCGACTGCGCCGAGGCGAAGCTTGGCGGGGCCTGCCCGAATTGCGGCGGCGAGTTGGTCCGGC
GCCCGTTGCGCCCTGCGGCAATGCTGAAGAAATATCCGGCATCGACGGAGCGCGTCTTGAAGCCCGGGGGCTGTGCGCCT
CGGCAAGCTGCTTGA

Upstream 100 bases:

>100_bases
GCGGAGATGATCCACGACATCCAGATCGAGGCGACGTTTCCTGATGGAACGAAGCTCGTCACGGTTCACGAGCCGATCCG
TTAGATGATGGGAGGCCACG

Downstream 100 bases:

>100_bases
GGAGAAGACGATGATCCCGGGTGAAATCATCACCGCCGCCGGTGAGATCGAGTTGAATGCCGGTCTCGAGACCGTCACCA
TCGAAGTTGCCAATTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAAMLKKYPASTERVLKPGGCAP
RQAA

Sequences:

>Translated_84_residues
MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAAMLKKYPASTERVLKPGGCAP
RQAA
>Mature_84_residues
MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAAMLKKYPASTERVLKPGGCAP
RQAA

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 9036; Mature: 9036

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
15.5 %Cys+Met (Translated Protein)
11.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
15.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAA
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHH
MLKKYPASTERVLKPGGCAPRQAA
HHHHCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MLSLRPNCECCDRDLPPDSRDAMICTFECSFCTDCAEAKLGGACPNCGGELVRRPLRPAA
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHH
MLKKYPASTERVLKPGGCAPRQAA
HHHHCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]