| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yjaB [C]
Identifier: 150397570
GI number: 150397570
Start: 2448323
End: 2448808
Strand: Direct
Name: yjaB [C]
Synonym: Smed_2370
Alternate gene names: 150397570
Gene position: 2448323-2448808 (Clockwise)
Preceding gene: 150397569
Following gene: 150397571
Centisome position: 64.74
GC content: 61.11
Gene sequence:
>486_bases ATGAGGAATAGCGACGCTGGACAGGTGCACTGTCGCGTTGCCGTCCCGGCCGATATGGCGGCATGCGCGGCCATTCTCAA TCGCTGGATAGACGCGACGCCATGGATGCCCCGCGTCCATCCTGAGGATGATGTGGAGCGGCATTATCGGGAAAGCGTCT TTGAGAGCGGTCCGGTCATCGTCGCCGACTGTCGAGGCGAAATCGCGGGATTTCTCGCTCTGTCTGGCGGCGGCCATGTG ACTGCTCTCTATCTGGACGAACGTTACAGAGGTCTTGGGATCGGCGCCGCTCTGATCCGCGAAGCCAAAAGGCGCGCAGA AACCGGGCTCGAGCTTTGGACGTTCGAAAACAATCGCGACGCTCAGCGCTTCTATGAACGCGAGGGTTTCGTCCCGGTGC GCAGGACCGATGGCGACAATGAAGAGGGGCTGCCGGATATTCTCTATCGATGGCGCGCCGACCCCTTGCGCGAAAGGGAG GCGTGA
Upstream 100 bases:
>100_bases TCGACGCTTCCGAGGGAACGCCCACTCGGCATCCGCGAAACGCCGGAGTTCCTGGAAATCGCGCATCGGGTTCGCGAAGG CTTGAGAGCGGGGCACAGCT
Downstream 100 bases:
>100_bases TCATGCGCGACGAAAGCTTCCTGAAAGACAAGCTGCTTCCGATCGGCACCGTCGTCCTGCTCTTGATTGCCGTCTGGTAC GTGGCTGCCGTCTATCTGAA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase; Acetyltransferase Gnat Family Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVIVADCRGEIAGFLALSGGGHV TALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRDAQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLRERE A
Sequences:
>Translated_161_residues MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVIVADCRGEIAGFLALSGGGHV TALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRDAQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLRERE A >Mature_161_residues MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVIVADCRGEIAGFLALSGGGHV TALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRDAQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLRERE A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18269; Mature: 18269
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVI CCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE VADCRGEIAGFLALSGGGHVTALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRD EEECCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCH AQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLREREA HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVI CCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE VADCRGEIAGFLALSGGGHVTALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRD EEECCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCH AQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLREREA HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA