| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397537
Identifier: 150397537
GI number: 150397537
Start: 2414863
End: 2415111
Strand: Direct
Name: 150397537
Synonym: Smed_2337
Alternate gene names: NA
Gene position: 2414863-2415111 (Clockwise)
Preceding gene: 150397531
Following gene: 150397538
Centisome position: 63.85
GC content: 60.64
Gene sequence:
>249_bases ATGAATAAAGGCAGGCTCAATGGACGCGGCGGCAGCCTCGTCTGCGGCTTGCGAACCGGCAGAACCGTGATACCGAACGA CACCGACAGCGAACGATCCCCGCAGGCGGCGGCACCCGTCGACCGCACCCAACGGATCGTCGAGAGCCGCGACCTTTTCC GTGGCCAGAGCGAGATTCTTATTTCCCACGACGGAGCGATCTACCGGATGAAGATCACCCGCCAGGGCAAGCTGATTCTG AACAAATAG
Upstream 100 bases:
>100_bases CGGCCGGCCCGGGAGGCGCAACCGCGCGATTCCTAACTTGACCGCAACAATCCGGTATTGCGTCCATAAAGAAATATGAG TAATGAAGTCAAGATACTAA
Downstream 100 bases:
>100_bases CGAGATGACGATGACTGAGAGCATGCGCCCCACCCCTGCTGAAATCCGTGCCTATCGCGCTGAAAACCCCAAGCTTCGCG AGCGCGACATTGCTGCGCAG
Product: hemin uptake protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MNKGRLNGRGGSLVCGLRTGRTVIPNDTDSERSPQAAAPVDRTQRIVESRDLFRGQSEILISHDGAIYRMKITRQGKLIL NK
Sequences:
>Translated_82_residues MNKGRLNGRGGSLVCGLRTGRTVIPNDTDSERSPQAAAPVDRTQRIVESRDLFRGQSEILISHDGAIYRMKITRQGKLIL NK >Mature_82_residues MNKGRLNGRGGSLVCGLRTGRTVIPNDTDSERSPQAAAPVDRTQRIVESRDLFRGQSEILISHDGAIYRMKITRQGKLIL NK
Specific function: Unknown
COG id: COG4256
COG function: function code P; Hemin uptake protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9092; Mature: 9092
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGRLNGRGGSLVCGLRTGRTVIPNDTDSERSPQAAAPVDRTQRIVESRDLFRGQSEIL CCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE ISHDGAIYRMKITRQGKLILNK EECCCEEEEEEECCCCEEEECC >Mature Secondary Structure MNKGRLNGRGGSLVCGLRTGRTVIPNDTDSERSPQAAAPVDRTQRIVESRDLFRGQSEIL CCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE ISHDGAIYRMKITRQGKLILNK EECCCEEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA