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The map label for this gene is 150397535

Identifier: 150397535

GI number: 150397535

Start: 2413322

End: 2414248

Strand: Reverse

Name: 150397535

Synonym: Smed_2335

Alternate gene names: NA

Gene position: 2414248-2413322 (Counterclockwise)

Preceding gene: 150397536

Following gene: 150397534

Centisome position: 63.84

GC content: 62.03

Gene sequence:

>927_bases
ATGAAGCACATGGTGAAATGGGCAGCCGCGATCGGCCTTTCCCTGCTGGCGCATGCCGGCGGGGCGATGTTCCTTGCGCC
CGAGAACGAGAAGGAGGAAGTGCTCGTCGCGGGCGGTTCGTCCGTCGAAGTGTCGCTGCTCGGGAATGCCTTCGAAGACA
CGGTTCAGGCAGGTGATCCCTCCGACGTGGTGGAGCCGACTGAAGAGACGCCCGAGGAACTTACGCCGACCGAGGCCGAG
GCGACGGAAGAGGTGGTCGAAGCCGTGGAGCCTGCGCCGACCGAAGCTGTCTCGGCACAGCCGTCCGAGATGACGCCGAC
GGAAGCGGACGTGATCCTTCCAGCCGAAGAAGTACCGGTGACCAAGGCCGATGACGCTGCGGTGATCGCCAGCGTGGCTC
CGGTCGAGACCGTCATTCCGGAAGAGAAACCCGAACTGCCAAAAGTCGTACAGCCGGAGGTCGAGAAGCCGGAACCAAAG
AAGGAGCCGGTAAAGAAAAAGAAGGTCGCGCGAAAAAAGGCGGGAGATGGCGGCAAGCAGGCGAAAACGCAGAACAAGGG
CAAAAGCGATGGTGTAGAAAATGCCAGGGCGGCGGCTGCCAGCGGAGAAAAACGGGGTGGGTCGCAGGAAATCGGCAATG
CCGCCGTGTCGAATTATCCCGGCAAGGTACGAAGGAAGCTCACCCGCGCCATACGCTATCCCTCGGCCGCCAAGCGACAG
GGACTGCGCGGCGTCGCTCATGTCAGTTTTACTGTAACTTCCGGTGGTGGGGTGGCAAGTGTCGGGATCACGAAGAGCGC
TGGTTCGCCCGTCCTCGATCAGGCGGCGTTGGAAACAGTACGTCGAGCTGCACCATTCCCAGCCATCCCAGCCGGTGCGG
GCCGCGACAGATGGGAGTTCAACATTCCGGTGGCATTCACTCGGTGA

Upstream 100 bases:

>100_bases
CGGGCTTGAAGACCGGATCGAAATCGGACGTCGAACTCAAGGGCTGAGCTCGAAAGGCTGACGTCCGCGTCCCGGAAAGC
GCCGGCGGAAGGCAAGTCAA

Downstream 100 bases:

>100_bases
ATTGCCGCTGTAAGGTCCGCCTGTGCCAACTGGCGCAAGCGATAAGGCGGCCTTGAATGATTTGAGATCGCGATGCGAGG
GTGCCGGTACCTTCGCCTGG

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKHMVKWAAAIGLSLLAHAGGAMFLAPENEKEEVLVAGGSSVEVSLLGNAFEDTVQAGDPSDVVEPTEETPEELTPTEAE
ATEEVVEAVEPAPTEAVSAQPSEMTPTEADVILPAEEVPVTKADDAAVIASVAPVETVIPEEKPELPKVVQPEVEKPEPK
KEPVKKKKVARKKAGDGGKQAKTQNKGKSDGVENARAAAASGEKRGGSQEIGNAAVSNYPGKVRRKLTRAIRYPSAAKRQ
GLRGVAHVSFTVTSGGGVASVGITKSAGSPVLDQAALETVRRAAPFPAIPAGAGRDRWEFNIPVAFTR

Sequences:

>Translated_308_residues
MKHMVKWAAAIGLSLLAHAGGAMFLAPENEKEEVLVAGGSSVEVSLLGNAFEDTVQAGDPSDVVEPTEETPEELTPTEAE
ATEEVVEAVEPAPTEAVSAQPSEMTPTEADVILPAEEVPVTKADDAAVIASVAPVETVIPEEKPELPKVVQPEVEKPEPK
KEPVKKKKVARKKAGDGGKQAKTQNKGKSDGVENARAAAASGEKRGGSQEIGNAAVSNYPGKVRRKLTRAIRYPSAAKRQ
GLRGVAHVSFTVTSGGGVASVGITKSAGSPVLDQAALETVRRAAPFPAIPAGAGRDRWEFNIPVAFTR
>Mature_308_residues
MKHMVKWAAAIGLSLLAHAGGAMFLAPENEKEEVLVAGGSSVEVSLLGNAFEDTVQAGDPSDVVEPTEETPEELTPTEAE
ATEEVVEAVEPAPTEAVSAQPSEMTPTEADVILPAEEVPVTKADDAAVIASVAPVETVIPEEKPELPKVVQPEVEKPEPK
KEPVKKKKVARKKAGDGGKQAKTQNKGKSDGVENARAAAASGEKRGGSQEIGNAAVSNYPGKVRRKLTRAIRYPSAAKRQ
GLRGVAHVSFTVTSGGGVASVGITKSAGSPVLDQAALETVRRAAPFPAIPAGAGRDRWEFNIPVAFTR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32101; Mature: 32101

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHMVKWAAAIGLSLLAHAGGAMFLAPENEKEEVLVAGGSSVEVSLLGNAFEDTVQAGDP
CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEEEECCCHHHHHHCCCCC
SDVVEPTEETPEELTPTEAEATEEVVEAVEPAPTEAVSAQPSEMTPTEADVILPAEEVPV
HHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEECHHHCCC
TKADDAAVIASVAPVETVIPEEKPELPKVVQPEVEKPEPKKEPVKKKKVARKKAGDGGKQ
CCCCCCEEHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
AKTQNKGKSDGVENARAAAASGEKRGGSQEIGNAAVSNYPGKVRRKLTRAIRYPSAAKRQ
HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH
GLRGVAHVSFTVTSGGGVASVGITKSAGSPVLDQAALETVRRAAPFPAIPAGAGRDRWEF
CCCEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
NIPVAFTR
ECCEEECC
>Mature Secondary Structure
MKHMVKWAAAIGLSLLAHAGGAMFLAPENEKEEVLVAGGSSVEVSLLGNAFEDTVQAGDP
CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEEEECCCHHHHHHCCCCC
SDVVEPTEETPEELTPTEAEATEEVVEAVEPAPTEAVSAQPSEMTPTEADVILPAEEVPV
HHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEECHHHCCC
TKADDAAVIASVAPVETVIPEEKPELPKVVQPEVEKPEPKKEPVKKKKVARKKAGDGGKQ
CCCCCCEEHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
AKTQNKGKSDGVENARAAAASGEKRGGSQEIGNAAVSNYPGKVRRKLTRAIRYPSAAKRQ
HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH
GLRGVAHVSFTVTSGGGVASVGITKSAGSPVLDQAALETVRRAAPFPAIPAGAGRDRWEF
CCCEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
NIPVAFTR
ECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA