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The map label for this gene is 150397497

Identifier: 150397497

GI number: 150397497

Start: 2374629

End: 2375471

Strand: Direct

Name: 150397497

Synonym: Smed_2297

Alternate gene names: NA

Gene position: 2374629-2375471 (Clockwise)

Preceding gene: 150397491

Following gene: 150397505

Centisome position: 62.79

GC content: 63.7

Gene sequence:

>843_bases
ATGCGCCGCACTGGAATCATTCTCGTTTCCGCCTTCCTCCTTTCGGGCGCAACGCTGCCCGAAACAGGGCCGCGGCCGGT
GCCGAAACCGGTCACGGGCGGGGATCAGCCGATGCCGACGCCAAAGCCGCCGCAGCCGCAAGCCGATGATGCGAAGGCAA
AGGAGTCCGGAGAGCCGCACAAGGCGCAGGAGCAGAATGGTGCGCGTGCCGGGGGAGAACAGCGCCCCGGTTGGAAGGAC
GACATTCTTGACGCCAGGCCGGTCCTGGCGATCGAAAAGGAAGACCCGAAGGAATATGCCGCCTGCCTGTCGGAACTCAA
ATCGCTCGGCAGCACGTTCGCCGAAGTCGATCGCATGGACGAGGGCAAGGGTTGCGGGATCGACAAGCCGGTCAAGGTCA
CTGCGATACTGCCGGGGGTGACCCTGAAGCCCGAGGGCGTGATGCGTTGCGAAGCCGCACTGGCGTTGGCTCGGTGGACC
AAAGAAACGGCAGCGCCGGCCGCAAGGAGCGCCTTCGGGGCCGAAGCCCGCATCGTCGCTTTGAACCAGGCCTCGACCTA
TATCTGCCGCCTGAGGAACAATGCCGACACCGGCAAGATCTCCGAACATGCGCGCGGCAACGCGGTCGACATCGCTTCAT
TCACCCTTGGCGACGGCAAGGCCGTCGAAATCCAGCCACGCGACGAGGATGGCACCCTTACCGGCGCCTTTCAGCGGGCG
GTCACGGCTTCGGCCTGCCTCTATTTCACGACCGTGCTCGACCCAGGCAGCGATGCTGCCCATGAAGACCATCTGCATCT
CGATGTCATCGAAAGAAGGAACGGGTATCGGTATTGCCGTTGA

Upstream 100 bases:

>100_bases
TGTGAAGCGAGGCCTCGTCCTCAGTTCCCGCACATTTGGAAACAGAATTGTTTCCCAGGCGTTTCGTCGTCTCGGACCGC
TGGAAATGGAGAGGACCTGT

Downstream 100 bases:

>100_bases
CGGCGCGCATGATGGCCCGCGGCGCCAGCCCAGCCTCTGAATCCCCTTCAGAACAAACCCTCGATGTATCCCTCCTCGTC
GAGCCGTATCCGCTCCGAAG

Product: extensin family protein

Products: NA

Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Extensin Domain Protein; Extensin Domain-Containing Protein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRRTGIILVSAFLLSGATLPETGPRPVPKPVTGGDQPMPTPKPPQPQADDAKAKESGEPHKAQEQNGARAGGEQRPGWKD
DILDARPVLAIEKEDPKEYAACLSELKSLGSTFAEVDRMDEGKGCGIDKPVKVTAILPGVTLKPEGVMRCEAALALARWT
KETAAPAARSAFGAEARIVALNQASTYICRLRNNADTGKISEHARGNAVDIASFTLGDGKAVEIQPRDEDGTLTGAFQRA
VTASACLYFTTVLDPGSDAAHEDHLHLDVIERRNGYRYCR

Sequences:

>Translated_280_residues
MRRTGIILVSAFLLSGATLPETGPRPVPKPVTGGDQPMPTPKPPQPQADDAKAKESGEPHKAQEQNGARAGGEQRPGWKD
DILDARPVLAIEKEDPKEYAACLSELKSLGSTFAEVDRMDEGKGCGIDKPVKVTAILPGVTLKPEGVMRCEAALALARWT
KETAAPAARSAFGAEARIVALNQASTYICRLRNNADTGKISEHARGNAVDIASFTLGDGKAVEIQPRDEDGTLTGAFQRA
VTASACLYFTTVLDPGSDAAHEDHLHLDVIERRNGYRYCR
>Mature_280_residues
MRRTGIILVSAFLLSGATLPETGPRPVPKPVTGGDQPMPTPKPPQPQADDAKAKESGEPHKAQEQNGARAGGEQRPGWKD
DILDARPVLAIEKEDPKEYAACLSELKSLGSTFAEVDRMDEGKGCGIDKPVKVTAILPGVTLKPEGVMRCEAALALARWT
KETAAPAARSAFGAEARIVALNQASTYICRLRNNADTGKISEHARGNAVDIASFTLGDGKAVEIQPRDEDGTLTGAFQRA
VTASACLYFTTVLDPGSDAAHEDHLHLDVIERRNGYRYCR

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29953; Mature: 29953

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTGIILVSAFLLSGATLPETGPRPVPKPVTGGDQPMPTPKPPQPQADDAKAKESGEPH
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
KAQEQNGARAGGEQRPGWKDDILDARPVLAIEKEDPKEYAACLSELKSLGSTFAEVDRMD
CHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
EGKGCGIDKPVKVTAILPGVTLKPEGVMRCEAALALARWTKETAAPAARSAFGAEARIVA
CCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEE
LNQASTYICRLRNNADTGKISEHARGNAVDIASFTLGDGKAVEIQPRDEDGTLTGAFQRA
ECCCCEEEEEECCCCCCCCCHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHH
VTASACLYFTTVLDPGSDAAHEDHLHLDVIERRNGYRYCR
HHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRRTGIILVSAFLLSGATLPETGPRPVPKPVTGGDQPMPTPKPPQPQADDAKAKESGEPH
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
KAQEQNGARAGGEQRPGWKDDILDARPVLAIEKEDPKEYAACLSELKSLGSTFAEVDRMD
CHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
EGKGCGIDKPVKVTAILPGVTLKPEGVMRCEAALALARWTKETAAPAARSAFGAEARIVA
CCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEE
LNQASTYICRLRNNADTGKISEHARGNAVDIASFTLGDGKAVEIQPRDEDGTLTGAFQRA
ECCCCEEEEEECCCCCCCCCHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHH
VTASACLYFTTVLDPGSDAAHEDHLHLDVIERRNGYRYCR
HHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA