| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is trpE(G) [H]
Identifier: 150397495
GI number: 150397495
Start: 2369676
End: 2371865
Strand: Reverse
Name: trpE(G) [H]
Synonym: Smed_2295
Alternate gene names: 150397495
Gene position: 2371865-2369676 (Counterclockwise)
Preceding gene: 150397496
Following gene: 150397494
Centisome position: 62.72
GC content: 61.96
Gene sequence:
>2190_bases ATGGCAGCGGTAATTCTGGAAGACGGCGCGGAGTGTTATACGACCAAGGGCGGCATCGTCGTCAACCGCAGGCGGCGTGA GGCCTCCTATACGGAGGCGATTGCCGGCTATGTCGACAGGCTGGACGAGCGGCGCGGCGCGGTCTTCTCCTCCAACTACG AATATCCGGGGCGTTACACGCGCTGGGACACCGCCGTCGTCGACCCGCCGCTTGCCATTTCCTCCTTCGGTCGTTCGCTT TGGATCGAAGCTTATAATGAGCGGGGCGAGGTGCTTCTCGCGCTGATCGCCGAGGATCTCAAGTCCGTTTCCGACATCAC GCTCGGCACGCTGACCGACCGCCGACTGGATCTCACCATCAATGAGCCCGATCGTGTCTTCACCGAGGAAGAGCGTTCGA AGATGCCGACCGTCTTCACGGTGCTTCGCGCGGTGACGGACCTCTTTCATTCGGAGGAGGATTCGAACCTCGGCCTCTAT GGCGCCTTTGGGTATGACCTGGCCTTCCAGTTCGACGCGATCGAACTGAAGCTCACGCGCCCGGAGGATCAGCGCGACAT GGTTCTCTTCCTGCCGGACGAGATCCTGGTCGTGGACCACTATGCGGCAAAGGCCTGGATCGATCGTTACGACTTCGCCA AGGAGGGGCTGTCGACGGAGGACAAGGCAGCCGATATCGCGCCTGAGGCGTTCCGCAGCGTCGACAGCATTCCGCCGCAC GGGGACCATCGCCCGGGCGAATATGCCGAGCTCGTCGTCAAGGCGAAGGAGAGCTTCCGCCGCGGCGATCTTTTCGAAGT GGTGCCGGGACAGAAATTCTACGAGCGCTGCGATAGTCGCCCTTCCGAGATTTCCAACCGGCTGAAGGCGATCAATCCGT CGCCCTATTCCTTCTTCATCAATCTCGGAAACCAGGAATATCTCGTCGGTGCTTCGCCGGAAATGTTCGTGCGCGTCTCC GGCCGGCGGATAGAGACCTGCCCCATCTCCGGTACGATCAAGCGCGGCGACGATCCGATCGCAGACAGCGAGCAGATACT GAAGCTGCTGAATTCGAAGAAGGACGAGTCCGAACTTACCATGTGCTCGGACGTGGACCGCAACGACAAGAGCCGCGTCT GCGTGCCTGGCTCGGTGAAAGTGATCGGCCGGCGGCAGATCGAGATGTATTCGCGGCTGATCCATACGGTCGATCACATC GAGGGCCGCCTGCGGGACGATATGGACGCCTTCGACGGATTTCTGAGCCATGCCTGGGCGGTGACGGTGACCGGCGCACC GAAGCTCTGGGCGATGCGGTTCATCGAGAGCCACGAGAAGAGCCCACGCGCCTGGTACGGGGGTGCGATCGGCATGGTAG GCTTCAACGGCGACATGAATACCGGTCTGACATTGCGTACGATCCGCATCAAGGACGGGATTGCCGAGGTGAGGGCGGGT GCGACGCTGCTCTATGATTCCAATCCGGAAGAAGAAGAAGCCGAAACCGAACTGAAGGCCTCTGCCATGATCGCAGCCAT CCGTGACGCGAAATCCGCAAACAGCGCCAACGCAGCGCGCGATGTTGCCGCCGTCGGCGCCGGGGTCAGCATCCTCCTCG TGGACCACGAGGACAGCTTCGTCCACACCCTGGCGAACTATTTCCGGCAGACGGGAGCGACCGTCACCACGGTGCGCACG CCGGTGGCCGAGGAAATCTTCGATAGGGTCAAGCCTGACCTCGTCGTGCTTTCGCCCGGTCCCGGCAACCCGAAAGACTT CGATTGCAAGGCGACGATCAAGAAGGCGCGGGCGCGCGAACTGCCGATCTTCGGCGTGTGCCTCGGGCTGCAGGCGCTTG CGGAGGCCTATGGCGGCAACTTGCGGCAACTGGCGGTCCCGATGCATGGCAAGCCCTCGCGCATTCGCGTCCTCGAACCC GGCATCGTCTTTTCGGGCCTCGGCAAGGAGGTGACCGTCGGGCGCTATCATTCGATCTTCGCCGATCCGTCCGGCCTTCC GCGCGAGTTTATGATTACGGCCGAAAGCGAGGACGGCACGATCATGGGCATCGAGCATACGAAGGAACCGGTGGCGGCGG TGCAATTCCATCCGGAATCGATCATGACGCTCGGCGGCGACGCCGGCATGCGGATGATCGAGAACGTGGTGGCCCATCTT GCAAAACGGGCGAAGATCAAGGCGGCCTGA
Upstream 100 bases:
>100_bases AGTCATGCGTGATTGAGAGTTGGAGCCGCCCGGAGATTTCGAGGCGGCTTTTTCGTATTCTGGCCGCGTGGGAAGACCGG GCTTTTACGGAGCGAGACGA
Downstream 100 bases:
>100_bases CCTTTTCGCGGCCGGTCTTTGGCACTCGGCCGTTTGACAAGCGATCCGTTATCGCCCATATGGCTCCCATCATCCGCCTG CGCGAAAATCCGCGCGGGCG
Product: anthranilate synthase
Products: NA
Alternate protein names: Glutamine amidotransferase [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MAAVILEDGAECYTTKGGIVVNRRRREASYTEAIAGYVDRLDERRGAVFSSNYEYPGRYTRWDTAVVDPPLAISSFGRSL WIEAYNERGEVLLALIAEDLKSVSDITLGTLTDRRLDLTINEPDRVFTEEERSKMPTVFTVLRAVTDLFHSEEDSNLGLY GAFGYDLAFQFDAIELKLTRPEDQRDMVLFLPDEILVVDHYAAKAWIDRYDFAKEGLSTEDKAADIAPEAFRSVDSIPPH GDHRPGEYAELVVKAKESFRRGDLFEVVPGQKFYERCDSRPSEISNRLKAINPSPYSFFINLGNQEYLVGASPEMFVRVS GRRIETCPISGTIKRGDDPIADSEQILKLLNSKKDESELTMCSDVDRNDKSRVCVPGSVKVIGRRQIEMYSRLIHTVDHI EGRLRDDMDAFDGFLSHAWAVTVTGAPKLWAMRFIESHEKSPRAWYGGAIGMVGFNGDMNTGLTLRTIRIKDGIAEVRAG ATLLYDSNPEEEEAETELKASAMIAAIRDAKSANSANAARDVAAVGAGVSILLVDHEDSFVHTLANYFRQTGATVTTVRT PVAEEIFDRVKPDLVVLSPGPGNPKDFDCKATIKKARARELPIFGVCLGLQALAEAYGGNLRQLAVPMHGKPSRIRVLEP GIVFSGLGKEVTVGRYHSIFADPSGLPREFMITAESEDGTIMGIEHTKEPVAAVQFHPESIMTLGGDAGMRMIENVVAHL AKRAKIKAA
Sequences:
>Translated_729_residues MAAVILEDGAECYTTKGGIVVNRRRREASYTEAIAGYVDRLDERRGAVFSSNYEYPGRYTRWDTAVVDPPLAISSFGRSL WIEAYNERGEVLLALIAEDLKSVSDITLGTLTDRRLDLTINEPDRVFTEEERSKMPTVFTVLRAVTDLFHSEEDSNLGLY GAFGYDLAFQFDAIELKLTRPEDQRDMVLFLPDEILVVDHYAAKAWIDRYDFAKEGLSTEDKAADIAPEAFRSVDSIPPH GDHRPGEYAELVVKAKESFRRGDLFEVVPGQKFYERCDSRPSEISNRLKAINPSPYSFFINLGNQEYLVGASPEMFVRVS GRRIETCPISGTIKRGDDPIADSEQILKLLNSKKDESELTMCSDVDRNDKSRVCVPGSVKVIGRRQIEMYSRLIHTVDHI EGRLRDDMDAFDGFLSHAWAVTVTGAPKLWAMRFIESHEKSPRAWYGGAIGMVGFNGDMNTGLTLRTIRIKDGIAEVRAG ATLLYDSNPEEEEAETELKASAMIAAIRDAKSANSANAARDVAAVGAGVSILLVDHEDSFVHTLANYFRQTGATVTTVRT PVAEEIFDRVKPDLVVLSPGPGNPKDFDCKATIKKARARELPIFGVCLGLQALAEAYGGNLRQLAVPMHGKPSRIRVLEP GIVFSGLGKEVTVGRYHSIFADPSGLPREFMITAESEDGTIMGIEHTKEPVAAVQFHPESIMTLGGDAGMRMIENVVAHL AKRAKIKAA >Mature_728_residues AAVILEDGAECYTTKGGIVVNRRRREASYTEAIAGYVDRLDERRGAVFSSNYEYPGRYTRWDTAVVDPPLAISSFGRSLW IEAYNERGEVLLALIAEDLKSVSDITLGTLTDRRLDLTINEPDRVFTEEERSKMPTVFTVLRAVTDLFHSEEDSNLGLYG AFGYDLAFQFDAIELKLTRPEDQRDMVLFLPDEILVVDHYAAKAWIDRYDFAKEGLSTEDKAADIAPEAFRSVDSIPPHG DHRPGEYAELVVKAKESFRRGDLFEVVPGQKFYERCDSRPSEISNRLKAINPSPYSFFINLGNQEYLVGASPEMFVRVSG RRIETCPISGTIKRGDDPIADSEQILKLLNSKKDESELTMCSDVDRNDKSRVCVPGSVKVIGRRQIEMYSRLIHTVDHIE GRLRDDMDAFDGFLSHAWAVTVTGAPKLWAMRFIESHEKSPRAWYGGAIGMVGFNGDMNTGLTLRTIRIKDGIAEVRAGA TLLYDSNPEEEEAETELKASAMIAAIRDAKSANSANAARDVAAVGAGVSILLVDHEDSFVHTLANYFRQTGATVTTVRTP VAEEIFDRVKPDLVVLSPGPGNPKDFDCKATIKKARARELPIFGVCLGLQALAEAYGGNLRQLAVPMHGKPSRIRVLEPG IVFSGLGKEVTVGRYHSIFADPSGLPREFMITAESEDGTIMGIEHTKEPVAAVQFHPESIMTLGGDAGMRMIENVVAHLA KRAKIKAA
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=410, Percent_Identity=31.7073170731707, Blast_Score=185, Evalue=9e-48, Organism=Escherichia coli, GI1788114, Length=429, Percent_Identity=29.6037296037296, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=42.0212765957447, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI1787517, Length=192, Percent_Identity=36.9791666666667, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1786809, Length=223, Percent_Identity=29.5964125560538, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786215, Length=151, Percent_Identity=31.7880794701987, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=271, Percent_Identity=36.90036900369, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6322638, Length=188, Percent_Identity=36.7021276595745, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6324361, Length=117, Percent_Identity=32.4786324786325, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR006805 - InterPro: IPR006220 - InterPro: IPR010112 - InterPro: IPR001317 - InterPro: IPR015890 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind; PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 80626; Mature: 80495
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVILEDGAECYTTKGGIVVNRRRREASYTEAIAGYVDRLDERRGAVFSSNYEYPGRYT CEEEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC RWDTAVVDPPLAISSFGRSLWIEAYNERGEVLLALIAEDLKSVSDITLGTLTDRRLDLTI CCCCEECCCCHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCEEEEECCCEEEEEE NEPDRVFTEEERSKMPTVFTVLRAVTDLFHSEEDSNLGLYGAFGYDLAFQFDAIELKLTR CCCCHHCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEEEC PEDQRDMVLFLPDEILVVDHYAAKAWIDRYDFAKEGLSTEDKAADIAPEAFRSVDSIPPH CCCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHCCCCCC GDHRPGEYAELVVKAKESFRRGDLFEVVPGQKFYERCDSRPSEISNRLKAINPSPYSFFI CCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE NLGNQEYLVGASPEMFVRVSGRRIETCPISGTIKRGDDPIADSEQILKLLNSKKDESELT EECCCEEEEECCCCEEEEECCCEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHH MCSDVDRNDKSRVCVPGSVKVIGRRQIEMYSRLIHTVDHIEGRLRDDMDAFDGFLSHAWA HHHCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VTVTGAPKLWAMRFIESHEKSPRAWYGGAIGMVGFNGDMNTGLTLRTIRIKDGIAEVRAG EEECCCCHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCCEEEEEEEECCCHHHHHCC ATLLYDSNPEEEEAETELKASAMIAAIRDAKSANSANAARDVAAVGAGVSILLVDHEDSF EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHH VHTLANYFRQTGATVTTVRTPVAEEIFDRVKPDLVVLSPGPGNPKDFDCKATIKKARARE HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC LPIFGVCLGLQALAEAYGGNLRQLAVPMHGKPSRIRVLEPGIVFSGLGKEVTVGRYHSIF CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCEEEECCCCEEEECCHHEEE ADPSGLPREFMITAESEDGTIMGIEHTKEPVAAVQFHPESIMTLGGDAGMRMIENVVAHL CCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCHHHEEECCHHHHHHHHHHHHHH AKRAKIKAA HHHHCCCCC >Mature Secondary Structure AAVILEDGAECYTTKGGIVVNRRRREASYTEAIAGYVDRLDERRGAVFSSNYEYPGRYT EEEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC RWDTAVVDPPLAISSFGRSLWIEAYNERGEVLLALIAEDLKSVSDITLGTLTDRRLDLTI CCCCEECCCCHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCEEEEECCCEEEEEE NEPDRVFTEEERSKMPTVFTVLRAVTDLFHSEEDSNLGLYGAFGYDLAFQFDAIELKLTR CCCCHHCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEEEC PEDQRDMVLFLPDEILVVDHYAAKAWIDRYDFAKEGLSTEDKAADIAPEAFRSVDSIPPH CCCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHCCCCCC GDHRPGEYAELVVKAKESFRRGDLFEVVPGQKFYERCDSRPSEISNRLKAINPSPYSFFI CCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE NLGNQEYLVGASPEMFVRVSGRRIETCPISGTIKRGDDPIADSEQILKLLNSKKDESELT EECCCEEEEECCCCEEEEECCCEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHH MCSDVDRNDKSRVCVPGSVKVIGRRQIEMYSRLIHTVDHIEGRLRDDMDAFDGFLSHAWA HHHCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VTVTGAPKLWAMRFIESHEKSPRAWYGGAIGMVGFNGDMNTGLTLRTIRIKDGIAEVRAG EEECCCCHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCCEEEEEEEECCCHHHHHCC ATLLYDSNPEEEEAETELKASAMIAAIRDAKSANSANAARDVAAVGAGVSILLVDHEDSF EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHH VHTLANYFRQTGATVTTVRTPVAEEIFDRVKPDLVVLSPGPGNPKDFDCKATIKKARARE HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC LPIFGVCLGLQALAEAYGGNLRQLAVPMHGKPSRIRVLEPGIVFSGLGKEVTVGRYHSIF CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCEEEECCCCEEEECCHHEEE ADPSGLPREFMITAESEDGTIMGIEHTKEPVAAVQFHPESIMTLGGDAGMRMIENVVAHL CCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCHHHEEECCHHHHHHHHHHHHHH AKRAKIKAA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2656657; 11481430 [H]