| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is ypeA [C]
Identifier: 150397491
GI number: 150397491
Start: 2366812
End: 2367318
Strand: Direct
Name: ypeA [C]
Synonym: Smed_2291
Alternate gene names: 150397491
Gene position: 2366812-2367318 (Clockwise)
Preceding gene: 150397490
Following gene: 150397497
Centisome position: 62.58
GC content: 60.95
Gene sequence:
>507_bases ATGCTGGTCCGATCGGCGCGTCCGCATGAGACGGACGCTCTCGCTCAAATCGGCCTTGCAGCGTGGCAAAAGGGGATCGC GCCGCTTGTGTCGGCAAATGTCGCCGCGGCCATCGAACAAACCAACCCGTTCCTGCCATTCGTGCGAGAACTTGGTTCGC GCATACTGGTCGCCGAAACCGATGGAGAACCAGCCGGCCTCGGGGCCTGCGAACACGGCGACGATGTCATCAGCGACATC TGGGTCGACCCGGCCTTCGAAGGGCGCGGCGCCGGATCAGCACTCATGAAGGCGCTTGAATCGCAAATCGCCCACCGTGG GTACAGGCAAGCCAGAATCCAGGTGGCGGCTCAGAACGCACGCGCACTCCAGCTCTACCAGCATCTCGGCTACCAGGTGC GTTGGAGAAAGGTCGCCTTCGACCCCATACTCAGGATCGATCTGGAGAAGGTTGGACTGTCCAAAGCACTTCTTCATCCC CAGGTCAGCGGATCCAAACGAAGATAG
Upstream 100 bases:
>100_bases GTCTCGGCATGGGGCTTTCACGCCTTGCCAACCGCGGCATCGTCGCTCGCATTCTCGGCGGCGTCACCGCTTTAGCCGGC GCGTCCCTGCTCTTCGGATG
Downstream 100 bases:
>100_bases AAGGCGAGCCGGCCTTCGTCCGGATTGGCGATCCCGTGAATGCCGAAGAGCGAGTCCCGTGCCATCTGCGCTTGGCCCGG CGTCGTCCAGCTTTCCCGGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase Protein; Acetyltransferase GNAT Family; GCN5-Related N-Acetyltransferase
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLVRSARPHETDALAQIGLAAWQKGIAPLVSANVAAAIEQTNPFLPFVRELGSRILVAETDGEPAGLGACEHGDDVISDI WVDPAFEGRGAGSALMKALESQIAHRGYRQARIQVAAQNARALQLYQHLGYQVRWRKVAFDPILRIDLEKVGLSKALLHP QVSGSKRR
Sequences:
>Translated_168_residues MLVRSARPHETDALAQIGLAAWQKGIAPLVSANVAAAIEQTNPFLPFVRELGSRILVAETDGEPAGLGACEHGDDVISDI WVDPAFEGRGAGSALMKALESQIAHRGYRQARIQVAAQNARALQLYQHLGYQVRWRKVAFDPILRIDLEKVGLSKALLHP QVSGSKRR >Mature_168_residues MLVRSARPHETDALAQIGLAAWQKGIAPLVSANVAAAIEQTNPFLPFVRELGSRILVAETDGEPAGLGACEHGDDVISDI WVDPAFEGRGAGSALMKALESQIAHRGYRQARIQVAAQNARALQLYQHLGYQVRWRKVAFDPILRIDLEKVGLSKALLHP QVSGSKRR
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18294; Mature: 18294
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRSARPHETDALAQIGLAAWQKGIAPLVSANVAAAIEQTNPFLPFVRELGSRILVAET CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEC DGEPAGLGACEHGDDVISDIWVDPAFEGRGAGSALMKALESQIAHRGYRQARIQVAAQNA CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCH RALQLYQHLGYQVRWRKVAFDPILRIDLEKVGLSKALLHPQVSGSKRR HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCHHHHHHCCCCCCCCCC >Mature Secondary Structure MLVRSARPHETDALAQIGLAAWQKGIAPLVSANVAAAIEQTNPFLPFVRELGSRILVAET CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEC DGEPAGLGACEHGDDVISDIWVDPAFEGRGAGSALMKALESQIAHRGYRQARIQVAAQNA CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCH RALQLYQHLGYQVRWRKVAFDPILRIDLEKVGLSKALLHPQVSGSKRR HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA