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The map label for this gene is hupE [H]

Identifier: 150397490

GI number: 150397490

Start: 2366234

End: 2366812

Strand: Direct

Name: hupE [H]

Synonym: Smed_2290

Alternate gene names: 150397490

Gene position: 2366234-2366812 (Clockwise)

Preceding gene: 150397485

Following gene: 150397491

Centisome position: 62.57

GC content: 63.04

Gene sequence:

>579_bases
ATGAAAAAATCCATCCTTATCGCAGCCGCACTCCTTTTCACTTCGTCCGCGCCAGCCTTGGCCCATCTCGATCCCGCAGA
ACACGGGTCGCTGTTGGCGGGGCTTTCCCATCCATTCTTCGGCGCCGACCACGTTCTGGCGATGGTTGCGGTCGGGCTTT
GGGCCGCCCAGATCGGCGGCAGGGCATTGTGGAGCGTGCCGGCTGCTTTCGTCACGACGATGATGCTCGGCTTCGCTCTC
GCATTGCTTGGCGCTCCCCTGCCCTTTGTCGAACCAGCCATTCTCGCCTCCGTCGTGGCGCTCGGTCTGATCGTCGCCAT
GGCCGTCCGGCTCGATGTTTCGATGGCTGCGGCCGTCGTCGCAGTCTTCGCGATTTTTCACGGGCATGCACATGGAGGAG
AATTGGGGAATGCCGGCGCCTGGTCATTTGCAGCCGGCTTCTTGATCGCGACCGTTCTCCTGCACATTGCGGGCCTGGGT
CTCGGCATGGGGCTTTCACGCCTTGCCAACCGCGGCATCGTCGCTCGCATTCTCGGCGGCGTCACCGCTTTAGCCGGCGC
GTCCCTGCTCTTCGGATGA

Upstream 100 bases:

>100_bases
GCCGGCTTTGCCATGATGGTAAATGTCCGGGGGTCAAATGACGTATGGACAGCCGGCAAGAGCGCAATAGTATCACCGTG
CCTTCCAAGTGGGGACCATG

Downstream 100 bases:

>100_bases
TGCTGGTCCGATCGGCGCGTCCGCATGAGACGGACGCTCTCGCTCAAATCGGCCTTGCAGCGTGGCAAAAGGGGATCGCG
CCGCTTGTGTCGGCAAATGT

Product: HupE/UreJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKKSILIAAALLFTSSAPALAHLDPAEHGSLLAGLSHPFFGADHVLAMVAVGLWAAQIGGRALWSVPAAFVTTMMLGFAL
ALLGAPLPFVEPAILASVVALGLIVAMAVRLDVSMAAAVVAVFAIFHGHAHGGELGNAGAWSFAAGFLIATVLLHIAGLG
LGMGLSRLANRGIVARILGGVTALAGASLLFG

Sequences:

>Translated_192_residues
MKKSILIAAALLFTSSAPALAHLDPAEHGSLLAGLSHPFFGADHVLAMVAVGLWAAQIGGRALWSVPAAFVTTMMLGFAL
ALLGAPLPFVEPAILASVVALGLIVAMAVRLDVSMAAAVVAVFAIFHGHAHGGELGNAGAWSFAAGFLIATVLLHIAGLG
LGMGLSRLANRGIVARILGGVTALAGASLLFG
>Mature_192_residues
MKKSILIAAALLFTSSAPALAHLDPAEHGSLLAGLSHPFFGADHVLAMVAVGLWAAQIGGRALWSVPAAFVTTMMLGFAL
ALLGAPLPFVEPAILASVVALGLIVAMAVRLDVSMAAAVVAVFAIFHGHAHGGELGNAGAWSFAAGFLIATVLLHIAGLG
LGMGLSRLANRGIVARILGGVTALAGASLLFG

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 19202; Mature: 19202

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSILIAAALLFTSSAPALAHLDPAEHGSLLAGLSHPFFGADHVLAMVAVGLWAAQIGG
CCCHHHHHHHHHHHCCCCCHHCCCCHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
RALWSVPAAFVTTMMLGFALALLGAPLPFVEPAILASVVALGLIVAMAVRLDVSMAAAVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFAIFHGHAHGGELGNAGAWSFAAGFLIATVLLHIAGLGLGMGLSRLANRGIVARILGG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VTALAGASLLFG
HHHHHHHHHHCC
>Mature Secondary Structure
MKKSILIAAALLFTSSAPALAHLDPAEHGSLLAGLSHPFFGADHVLAMVAVGLWAAQIGG
CCCHHHHHHHHHHHCCCCCHHCCCCHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
RALWSVPAAFVTTMMLGFALALLGAPLPFVEPAILASVVALGLIVAMAVRLDVSMAAAVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFAIFHGHAHGGELGNAGAWSFAAGFLIATVLLHIAGLGLGMGLSRLANRGIVARILGG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VTALAGASLLFG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]