| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is yqjG [H]
Identifier: 150397481
GI number: 150397481
Start: 2358655
End: 2359647
Strand: Direct
Name: yqjG [H]
Synonym: Smed_2281
Alternate gene names: 150397481
Gene position: 2358655-2359647 (Clockwise)
Preceding gene: 150397479
Following gene: 150397483
Centisome position: 62.37
GC content: 59.42
Gene sequence:
>993_bases ATGGGCAGACTGGTCAATGGTGTCTGGCAGGACGTCTGGTACGATACCCGCGCAACCAACGGTCATTTCAAGCGCAGCGA GTCGCAGTTCCGCAACTGGATCACCGCCGATGGATCGGCCGGCCCTTCCGGCGAAGGCGGCTTCGATGCGGAAGCTGGCC GCTATCATCTTTATGTATCCCTCGCCTGCCCCTGGGCACATCGCACACTGATCTTCCGCAAGCTCAAAAAGCTCGAAGGT ATCGTCTCGCTTTCCGTCGTCGACCCGCTGATGCTGGCGAACGGCTGGGAATTCGACAATCAGGCTGACGAGGACGAGAA CGGCGGCACCGTCGACCATCTCTTCGGCTCGCGGGCACTCTGGGAAGTCTATCTTCGCGCCGATCCCGTCTATTCCGGCC GGGTGACAGTTCCAGTGCTATGGGACAAGCGGAAGAACACGATCGTCTCTAACGAATCCGCCGAGATCATCCGCATGTTC AACACGGCCTTCGATCATCTCACAGGCTCGACGGCGGATTTCTGCCCCGAAGAACTGCGCCCGGAAATTGACGCGCTCAA TGCGCGCATCTACGACACGGTCAACAACGGCGTCTACAAGGCCGGCTTCGCAACAAGCCAGTCGGCCTATGAGGAGAGTG TCACGGCGCTCTTTGTAATGCTGGACGAACTGGAGAGCCGTCTCGGGTCACAGCGCTACCTGCTCGGCGGCCGCTTGACC GAAGCCGATTGGCGGCTGTTTACGACGCTCGTCCGTTTCGATCCCGTCTATGTGGGTCATTTCAAATGCAACATCCGCCG CATTGCCGATTATCCGAACCTCTACGGCTATCTGCGTGAGCTCTACCAGGTGCCGGGCGTCGCCGAAACGGTGAACATGC ACCACATCAAAAAGCACTATTACTGCAGCCATACCACGATCAATCCCACGGGCATCGTGCCGGTGGGGCCGGCGCTCGAC CTTGAAGCGCCGCACGGGCGGGATCGTTTCTAA
Upstream 100 bases:
>100_bases TGGTCAAAGCCTAAAACGCACTGTTCGAAATTTCACATCTATCGGCCGAGCGTCCCGGCGCTATCTATGGCGTCAGGAAA CGAGCGAGAAGGAGTTCGCC
Downstream 100 bases:
>100_bases GGCTGGCTTCCTACCAGAACGCGTCCGGCACCGCCGTTCCCGCCAGTTCCGCGAGTCGGCGCCGGGTCGCGGGCGTCGTG TCCGACGGAAGCTCGTCCGG
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MGRLVNGVWQDVWYDTRATNGHFKRSESQFRNWITADGSAGPSGEGGFDAEAGRYHLYVSLACPWAHRTLIFRKLKKLEG IVSLSVVDPLMLANGWEFDNQADEDENGGTVDHLFGSRALWEVYLRADPVYSGRVTVPVLWDKRKNTIVSNESAEIIRMF NTAFDHLTGSTADFCPEELRPEIDALNARIYDTVNNGVYKAGFATSQSAYEESVTALFVMLDELESRLGSQRYLLGGRLT EADWRLFTTLVRFDPVYVGHFKCNIRRIADYPNLYGYLRELYQVPGVAETVNMHHIKKHYYCSHTTINPTGIVPVGPALD LEAPHGRDRF
Sequences:
>Translated_330_residues MGRLVNGVWQDVWYDTRATNGHFKRSESQFRNWITADGSAGPSGEGGFDAEAGRYHLYVSLACPWAHRTLIFRKLKKLEG IVSLSVVDPLMLANGWEFDNQADEDENGGTVDHLFGSRALWEVYLRADPVYSGRVTVPVLWDKRKNTIVSNESAEIIRMF NTAFDHLTGSTADFCPEELRPEIDALNARIYDTVNNGVYKAGFATSQSAYEESVTALFVMLDELESRLGSQRYLLGGRLT EADWRLFTTLVRFDPVYVGHFKCNIRRIADYPNLYGYLRELYQVPGVAETVNMHHIKKHYYCSHTTINPTGIVPVGPALD LEAPHGRDRF >Mature_329_residues GRLVNGVWQDVWYDTRATNGHFKRSESQFRNWITADGSAGPSGEGGFDAEAGRYHLYVSLACPWAHRTLIFRKLKKLEGI VSLSVVDPLMLANGWEFDNQADEDENGGTVDHLFGSRALWEVYLRADPVYSGRVTVPVLWDKRKNTIVSNESAEIIRMFN TAFDHLTGSTADFCPEELRPEIDALNARIYDTVNNGVYKAGFATSQSAYEESVTALFVMLDELESRLGSQRYLLGGRLTE ADWRLFTTLVRFDPVYVGHFKCNIRRIADYPNLYGYLRELYQVPGVAETVNMHHIKKHYYCSHTTINPTGIVPVGPALDL EAPHGRDRF
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=328, Percent_Identity=65.5487804878049, Blast_Score=430, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6322929, Length=366, Percent_Identity=39.0710382513661, Blast_Score=231, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323906, Length=363, Percent_Identity=36.9146005509642, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321593, Length=338, Percent_Identity=34.6153846153846, Blast_Score=164, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 37366; Mature: 37235
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLVNGVWQDVWYDTRATNGHFKRSESQFRNWITADGSAGPSGEGGFDAEAGRYHLYVS CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEE LACPWAHRTLIFRKLKKLEGIVSLSVVDPLMLANGWEFDNQADEDENGGTVDHLFGSRAL EECCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEE WEVYLRADPVYSGRVTVPVLWDKRKNTIVSNESAEIIRMFNTAFDHLTGSTADFCPEELR EEEEEECCCCCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHCCHHHHC PEIDALNARIYDTVNNGVYKAGFATSQSAYEESVTALFVMLDELESRLGSQRYLLGGRLT CCHHHHCEEEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC EADWRLFTTLVRFDPVYVGHFKCNIRRIADYPNLYGYLRELYQVPGVAETVNMHHIKKHY CHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHE YCSHTTINPTGIVPVGPALDLEAPHGRDRF EEECCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure GRLVNGVWQDVWYDTRATNGHFKRSESQFRNWITADGSAGPSGEGGFDAEAGRYHLYVS CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEE LACPWAHRTLIFRKLKKLEGIVSLSVVDPLMLANGWEFDNQADEDENGGTVDHLFGSRAL EECCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEE WEVYLRADPVYSGRVTVPVLWDKRKNTIVSNESAEIIRMFNTAFDHLTGSTADFCPEELR EEEEEECCCCCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHCCHHHHC PEIDALNARIYDTVNNGVYKAGFATSQSAYEESVTALFVMLDELESRLGSQRYLLGGRLT CCHHHHCEEEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC EADWRLFTTLVRFDPVYVGHFKCNIRRIADYPNLYGYLRELYQVPGVAETVNMHHIKKHY CHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHE YCSHTTINPTGIVPVGPALDLEAPHGRDRF EEECCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]