Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397476

Identifier: 150397476

GI number: 150397476

Start: 2351558

End: 2352478

Strand: Direct

Name: 150397476

Synonym: Smed_2276

Alternate gene names: NA

Gene position: 2351558-2352478 (Clockwise)

Preceding gene: 150397475

Following gene: 150397477

Centisome position: 62.18

GC content: 64.93

Gene sequence:

>921_bases
ATGGCCTCGATCGGGCACATCGTCGCGCGTACCCCTTCCGGTGAGGTGCTGTCGCGCGCGCAGCAGCGCGCAATGCTCGT
GCCCGACTGTCTCGTCGAAGCGCGAAGGATCGCCAATACGGTGATCACCGGCTGGCACGGCCGCCGCAAGCGCGGCATCG
GCGAGAATTTCTGGCAGTTCCGCCCCTACAGCAATGGGGAGAGCCTGTCGCGAATCGACTGGCGCCGTTCCGCCAAGGAC
GACCACACCTATGTCCGCGACCGCGAATGGGAGGCAGCGCATACGATCTGGCTCTGGGCCGATCTCTCGCCCTCGATGAT
GTACAAGTCAACGCTGGGTGCCGTTTCGAAGGAGAGCCGCGCCCTGGTCCTGATGCTGGCGCTCGCCGAAATTCTCGCCC
GCTCCGGCGAACGGATCGGCTGCCCGGGGGTGATGGAGCCGGTTTCGGCACGCAACGCCGCCGAGCGGCTGGCAACCGCG
ATCATGCATAGCCCGCTGTCGGAGGGTTTGCCCGATACGGGAATGGTACGCGGTGCCAGCGACCTGGTCCTGATCGGCGA
TTTTCTTGATCCCGCGGACACGATAATGGAGCGACTTGGACCACTCGCCCGCAGAGGCCTGCGCGGCCACGTCGTGGAAA
TCGCCGACCCTGCCGAGGAAGTCTTCCCCTATGCCGGCAGGACCGAGTTCACCGACCCTGAAACCGGTGAGAAGCTGACA
GCCGGGCGCGCCGAAATCCTGCGCGAGGATTACCAGCGCGCCTATCGCGCTCGCCGCGAAAGTCTCGGCACGAGCCTGCG
CCATCTCGGCTGGACCTTTATTCCGCACAGGACGGATCGGGCGGCATCGGAAGCTTTGGTCGCGGTGCATATGTATCTTT
CCGGCATGCCGGGCCGAGTTACACATGGAGGGGTCTCATGA

Upstream 100 bases:

>100_bases
TCTCCAGCACCGCATGGCGCTGACCTTCGCCGCCCGGGCGGAGGGCATGTCGGTGCGCGATGTGATCGCCGACCTCGTGA
AACAGGCCAAGGGCTGACGC

Downstream 100 bases:

>100_bases
TCGGCAGCCTCTCCTTCATCTTTGCGAACCCGGCAATATTGGCGGCACTCATCGCACTGCCGGTGATCTGGTGGCTGCTG
CGCATGACGCCGCCACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQFRPYSNGESLSRIDWRRSAKD
DHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESRALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATA
IMHSPLSEGLPDTGMVRGASDLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT
AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRVTHGGVS

Sequences:

>Translated_306_residues
MASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQFRPYSNGESLSRIDWRRSAKD
DHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESRALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATA
IMHSPLSEGLPDTGMVRGASDLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT
AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRVTHGGVS
>Mature_305_residues
ASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQFRPYSNGESLSRIDWRRSAKDD
HTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESRALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATAI
MHSPLSEGLPDTGMVRGASDLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLTA
GRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRVTHGGVS

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33938; Mature: 33807

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQF
CCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCC
RPYSNGESLSRIDWRRSAKDDHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESR
CCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCH
ALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATAIMHSPLSEGLPDTGMVRGAS
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCHHH
AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCC
THGGVS
CCCCCC
>Mature Secondary Structure 
ASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQF
CCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCC
RPYSNGESLSRIDWRRSAKDDHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESR
CCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCH
ALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATAIMHSPLSEGLPDTGMVRGAS
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCHHH
AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCC
THGGVS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA