| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397476
Identifier: 150397476
GI number: 150397476
Start: 2351558
End: 2352478
Strand: Direct
Name: 150397476
Synonym: Smed_2276
Alternate gene names: NA
Gene position: 2351558-2352478 (Clockwise)
Preceding gene: 150397475
Following gene: 150397477
Centisome position: 62.18
GC content: 64.93
Gene sequence:
>921_bases ATGGCCTCGATCGGGCACATCGTCGCGCGTACCCCTTCCGGTGAGGTGCTGTCGCGCGCGCAGCAGCGCGCAATGCTCGT GCCCGACTGTCTCGTCGAAGCGCGAAGGATCGCCAATACGGTGATCACCGGCTGGCACGGCCGCCGCAAGCGCGGCATCG GCGAGAATTTCTGGCAGTTCCGCCCCTACAGCAATGGGGAGAGCCTGTCGCGAATCGACTGGCGCCGTTCCGCCAAGGAC GACCACACCTATGTCCGCGACCGCGAATGGGAGGCAGCGCATACGATCTGGCTCTGGGCCGATCTCTCGCCCTCGATGAT GTACAAGTCAACGCTGGGTGCCGTTTCGAAGGAGAGCCGCGCCCTGGTCCTGATGCTGGCGCTCGCCGAAATTCTCGCCC GCTCCGGCGAACGGATCGGCTGCCCGGGGGTGATGGAGCCGGTTTCGGCACGCAACGCCGCCGAGCGGCTGGCAACCGCG ATCATGCATAGCCCGCTGTCGGAGGGTTTGCCCGATACGGGAATGGTACGCGGTGCCAGCGACCTGGTCCTGATCGGCGA TTTTCTTGATCCCGCGGACACGATAATGGAGCGACTTGGACCACTCGCCCGCAGAGGCCTGCGCGGCCACGTCGTGGAAA TCGCCGACCCTGCCGAGGAAGTCTTCCCCTATGCCGGCAGGACCGAGTTCACCGACCCTGAAACCGGTGAGAAGCTGACA GCCGGGCGCGCCGAAATCCTGCGCGAGGATTACCAGCGCGCCTATCGCGCTCGCCGCGAAAGTCTCGGCACGAGCCTGCG CCATCTCGGCTGGACCTTTATTCCGCACAGGACGGATCGGGCGGCATCGGAAGCTTTGGTCGCGGTGCATATGTATCTTT CCGGCATGCCGGGCCGAGTTACACATGGAGGGGTCTCATGA
Upstream 100 bases:
>100_bases TCTCCAGCACCGCATGGCGCTGACCTTCGCCGCCCGGGCGGAGGGCATGTCGGTGCGCGATGTGATCGCCGACCTCGTGA AACAGGCCAAGGGCTGACGC
Downstream 100 bases:
>100_bases TCGGCAGCCTCTCCTTCATCTTTGCGAACCCGGCAATATTGGCGGCACTCATCGCACTGCCGGTGATCTGGTGGCTGCTG CGCATGACGCCGCCACGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQFRPYSNGESLSRIDWRRSAKD DHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESRALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATA IMHSPLSEGLPDTGMVRGASDLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRVTHGGVS
Sequences:
>Translated_306_residues MASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQFRPYSNGESLSRIDWRRSAKD DHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESRALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATA IMHSPLSEGLPDTGMVRGASDLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRVTHGGVS >Mature_305_residues ASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQFRPYSNGESLSRIDWRRSAKDD HTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESRALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATAI MHSPLSEGLPDTGMVRGASDLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLTA GRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRVTHGGVS
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33938; Mature: 33807
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQF CCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCC RPYSNGESLSRIDWRRSAKDDHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESR CCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCH ALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATAIMHSPLSEGLPDTGMVRGAS HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT CEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCHHH AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCC THGGVS CCCCCC >Mature Secondary Structure ASIGHIVARTPSGEVLSRAQQRAMLVPDCLVEARRIANTVITGWHGRRKRGIGENFWQF CCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCC RPYSNGESLSRIDWRRSAKDDHTYVRDREWEAAHTIWLWADLSPSMMYKSTLGAVSKESR CCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCH ALVLMLALAEILARSGERIGCPGVMEPVSARNAAERLATAIMHSPLSEGLPDTGMVRGAS HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DLVLIGDFLDPADTIMERLGPLARRGLRGHVVEIADPAEEVFPYAGRTEFTDPETGEKLT CEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCHHH AGRAEILREDYQRAYRARRESLGTSLRHLGWTFIPHRTDRAASEALVAVHMYLSGMPGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCC THGGVS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA