| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yeaC [H]
Identifier: 150397475
GI number: 150397475
Start: 2350541
End: 2351554
Strand: Direct
Name: yeaC [H]
Synonym: Smed_2275
Alternate gene names: 150397475
Gene position: 2350541-2351554 (Clockwise)
Preceding gene: 150397471
Following gene: 150397476
Centisome position: 62.15
GC content: 65.38
Gene sequence:
>1014_bases ATGAGTGTGATGAGAGGCGCGACCGAACTTGCCGACGAAAAGGCGATCGTCGCAGCAGCCGAAGCGGCGCTCGGGGAGAT CGCGCTCGTCCGAGCCGAGATCGGCAAGGTCATTTTCGGACAGGAAAGCGTCGTGGAACAGACGCTGCTTGCGGTGCTTT CCGGCGGGCACGCGCTGCTTGTCGGCGTACCGGGGCTTGCCAAGACCAAGCTCGTTGCCACCCTCGGCACCGTTCTCGGG CTCGACAACAGCCGGATTCAATTCACGCCCGACCTGATGCCCTCGGATATCCTTGGTTCCGAGGTGATGGACCAGGATGT CTCCGGCCATCGCTCTTTCCGATTCATTCCAGGCCCGATCTTCACGCAGCTCCTGATGGCCGACGAGATCAACCGCGCCT CGCCGCGCACCCAGTCGGCCCTTCTGCAGGCGATGCAGGAGTATCACATCACGATCGCCGGCGACCGCAAGGACCTGCCG CAGCCCTTTCACGTGCTGGCAACACAGAATCCGCTGGAGCAGGAAGGCACCTATCCGCTGCCGGAAGCCCAGCTCGACCG CTTCCTGATGCAGGTGGATGTCGGCTATCCCGAGCTTGCCGCCGAACGGCAGATCCTGCTGGAGACGACGGGCCTTGCCG AAACCGAGGCGCGGCCCGTGATCGACGCAGGGCGCCTGCAGCAGGTCCAAGGCCTGATCCGGCAGATGCCCGTCGGTGAG AAGGTGGTCGATGCCATTCTCGCCCTGGTCCGTTCCGCGCGCCCCGGCAACGGCAATGCTGCTACCGACAAGAACGTCGC CTGGGGGCCGGGTCCGCGCGCCGGGCAGGCACTGATGCTTTGCGCCCGCGCCCGAGCTCTTTACGATGGCCGGCTTGCTC CGTCGATCGACGATGTCCTTGCGCTTGCCGAACCGGTTCTCCAGCACCGCATGGCGCTGACCTTCGCCGCCCGGGCGGAG GGCATGTCGGTGCGCGATGTGATCGCCGACCTCGTGAAACAGGCCAAGGGCTGA
Upstream 100 bases:
>100_bases GCGGCGGCTTGTCAGCCGCCCCGCGGGGTCTAAATTGAAAACAGGACTGGACAGCCGGCGACGGCGGTTCCTCCAAAAGC CGACGATCGGGAGACGACTG
Downstream 100 bases:
>100_bases CGCATGGCCTCGATCGGGCACATCGTCGCGCGTACCCCTTCCGGTGAGGTGCTGTCGCGCGCGCAGCAGCGCGCAATGCT CGTGCCCGACTGTCTCGTCG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSVMRGATELADEKAIVAAAEAALGEIALVRAEIGKVIFGQESVVEQTLLAVLSGGHALLVGVPGLAKTKLVATLGTVLG LDNSRIQFTPDLMPSDILGSEVMDQDVSGHRSFRFIPGPIFTQLLMADEINRASPRTQSALLQAMQEYHITIAGDRKDLP QPFHVLATQNPLEQEGTYPLPEAQLDRFLMQVDVGYPELAAERQILLETTGLAETEARPVIDAGRLQQVQGLIRQMPVGE KVVDAILALVRSARPGNGNAATDKNVAWGPGPRAGQALMLCARARALYDGRLAPSIDDVLALAEPVLQHRMALTFAARAE GMSVRDVIADLVKQAKG
Sequences:
>Translated_337_residues MSVMRGATELADEKAIVAAAEAALGEIALVRAEIGKVIFGQESVVEQTLLAVLSGGHALLVGVPGLAKTKLVATLGTVLG LDNSRIQFTPDLMPSDILGSEVMDQDVSGHRSFRFIPGPIFTQLLMADEINRASPRTQSALLQAMQEYHITIAGDRKDLP QPFHVLATQNPLEQEGTYPLPEAQLDRFLMQVDVGYPELAAERQILLETTGLAETEARPVIDAGRLQQVQGLIRQMPVGE KVVDAILALVRSARPGNGNAATDKNVAWGPGPRAGQALMLCARARALYDGRLAPSIDDVLALAEPVLQHRMALTFAARAE GMSVRDVIADLVKQAKG >Mature_336_residues SVMRGATELADEKAIVAAAEAALGEIALVRAEIGKVIFGQESVVEQTLLAVLSGGHALLVGVPGLAKTKLVATLGTVLGL DNSRIQFTPDLMPSDILGSEVMDQDVSGHRSFRFIPGPIFTQLLMADEINRASPRTQSALLQAMQEYHITIAGDRKDLPQ PFHVLATQNPLEQEGTYPLPEAQLDRFLMQVDVGYPELAAERQILLETTGLAETEARPVIDAGRLQQVQGLIRQMPVGEK VVDAILALVRSARPGNGNAATDKNVAWGPGPRAGQALMLCARARALYDGRLAPSIDDVLALAEPVLQHRMALTFAARAEG MSVRDVIADLVKQAKG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36044; Mature: 35913
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVMRGATELADEKAIVAAAEAALGEIALVRAEIGKVIFGQESVVEQTLLAVLSGGHALL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE VGVPGLAKTKLVATLGTVLGLDNSRIQFTPDLMPSDILGSEVMDQDVSGHRSFRFIPGPI EECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCHH FTQLLMADEINRASPRTQSALLQAMQEYHITIAGDRKDLPQPFHVLATQNPLEQEGTYPL HHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCEEHCCCCCCHHCCCCCC PEAQLDRFLMQVDVGYPELAAERQILLETTGLAETEARPVIDAGRLQQVQGLIRQMPVGE CHHHHHHHHHHHCCCCHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH KVVDAILALVRSARPGNGNAATDKNVAWGPGPRAGQALMLCARARALYDGRLAPSIDDVL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH ALAEPVLQHRMALTFAARAEGMSVRDVIADLVKQAKG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SVMRGATELADEKAIVAAAEAALGEIALVRAEIGKVIFGQESVVEQTLLAVLSGGHALL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE VGVPGLAKTKLVATLGTVLGLDNSRIQFTPDLMPSDILGSEVMDQDVSGHRSFRFIPGPI EECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCHH FTQLLMADEINRASPRTQSALLQAMQEYHITIAGDRKDLPQPFHVLATQNPLEQEGTYPL HHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCEEHCCCCCCHHCCCCCC PEAQLDRFLMQVDVGYPELAAERQILLETTGLAETEARPVIDAGRLQQVQGLIRQMPVGE CHHHHHHHHHHHCCCCHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH KVVDAILALVRSARPGNGNAATDKNVAWGPGPRAGQALMLCARARALYDGRLAPSIDDVL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH ALAEPVLQHRMALTFAARAEGMSVRDVIADLVKQAKG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]