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The map label for this gene is csaA [H]

Identifier: 150397447

GI number: 150397447

Start: 2325063

End: 2325404

Strand: Reverse

Name: csaA [H]

Synonym: Smed_2247

Alternate gene names: 150397447

Gene position: 2325404-2325063 (Counterclockwise)

Preceding gene: 150397448

Following gene: 150397441

Centisome position: 61.49

GC content: 56.73

Gene sequence:

>342_bases
ATGGCGGAAATCATCGAATTTGCCGATTTTGAACGCGTCGACATTCGTGTCGGGACAATCATCGAGGCAGAAACCTTTCC
CGAAGCACGCAAACCGGCTTATAAGCTGAGGATCGATTTCGGCTCTGAGATCGGCATCAGGAAATCGTCGGCGCAAATCA
CGGCGCACTATCGGCCTGAAGATCTCGTCGGCAGGCAGGTGCTGGGTGTGGTGAATTTTCCCCCGCGCCAGATCGGTCCC
TTCCGTTCCGAAGTGCTGACGCTCGGCTTCGAAGACGAGGCGGGTGCCATTGTTCTCGCCTCCACCGGCAAGCCTGTCCC
GAACGGCAAGAAACTGATGTGA

Upstream 100 bases:

>100_bases
GAGGCGATGCTGCCCGTGTGATACGAGGTACATCCGGCGGTCTTCCCGAATCCGACGCAATGCGTTAAGCCTGCTCCGAG
TTCCTCAGCAGGGAATCGCC

Downstream 100 bases:

>100_bases
GCTGCGCTACCGGCCGCTCCAGTCCGGCGGGGGAGGGCTCCCAGATCACGATGTTTCAGGTCGGATCGACCTAAAAACAT
GAACGTGATCGCTTCCGAAT

Product: export-related chaperone CsaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAEIIEFADFERVDIRVGTIIEAETFPEARKPAYKLRIDFGSEIGIRKSSAQITAHYRPEDLVGRQVLGVVNFPPRQIGP
FRSEVLTLGFEDEAGAIVLASTGKPVPNGKKLM

Sequences:

>Translated_113_residues
MAEIIEFADFERVDIRVGTIIEAETFPEARKPAYKLRIDFGSEIGIRKSSAQITAHYRPEDLVGRQVLGVVNFPPRQIGP
FRSEVLTLGFEDEAGAIVLASTGKPVPNGKKLM
>Mature_112_residues
AEIIEFADFERVDIRVGTIIEAETFPEARKPAYKLRIDFGSEIGIRKSSAQITAHYRPEDLVGRQVLGVVNFPPRQIGPF
RSEVLTLGFEDEAGAIVLASTGKPVPNGKKLM

Specific function: Could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the secA protein [H]

COG id: COG0073

COG function: function code R; EMAP domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR008231
- InterPro:   IPR002547 [H]

Pfam domain/function: PF01588 tRNA_bind [H]

EC number: NA

Molecular weight: Translated: 12486; Mature: 12354

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIIEFADFERVDIRVGTIIEAETFPEARKPAYKLRIDFGSEIGIRKSSAQITAHYRPE
CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEECCH
DLVGRQVLGVVNFPPRQIGPFRSEVLTLGFEDEAGAIVLASTGKPVPNGKKLM
HHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AEIIEFADFERVDIRVGTIIEAETFPEARKPAYKLRIDFGSEIGIRKSSAQITAHYRPE
CCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEECCH
DLVGRQVLGVVNFPPRQIGPFRSEVLTLGFEDEAGAIVLASTGKPVPNGKKLM
HHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1435734; 9384377 [H]