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The map label for this gene is yliI [H]

Identifier: 150397436

GI number: 150397436

Start: 2315788

End: 2316978

Strand: Direct

Name: yliI [H]

Synonym: Smed_2236

Alternate gene names: 150397436

Gene position: 2315788-2316978 (Clockwise)

Preceding gene: 150397435

Following gene: 150397437

Centisome position: 61.23

GC content: 62.89

Gene sequence:

>1191_bases
ATGCGGCATAGGCGCTGGACGGCTCTCGGATCAAGCAATATCCCTGCGATCCTAATATCCAGTATGGCGGCTGCGGCCCC
GTTCCTTGTGAACTTCACCGCATTCGCTGCGCTTGCGCAGGAGGCGCGGGAATTTTCGACGCAGACAGGAACCGTTCTCG
TCGAGACGCTCGCCTCCGGGCTCGAACATCCCTGGGCGGTTGAGGCCATGCCCGATGGGGCGCTTATCGTTACCGAGCGA
CCGGGCCGGCTACGCATCCTGCGCGACGGCAAGCTTTCAGACGCGATCAAGGGCGTACCCACAGTGGCCGCCCACGGCCA
GGGCGGCCTTCTCGATGTCGCTCTCGATCGGCAATTCGCGACGAACAGGACTATTTATCTCACCTTATCCGCGCGCGGCG
AAGGCGGCTACGGCACGGCCCTTGTCCGCGCGGCCCTCTCGCAGGATGGTCGGAGCCTGACGGATGCGAAGGAGATCTTC
CGGATGAACCGGTTCACCCGGAAGGGGCAGCATTTCGGCTCACGCATTGCCATCGACAAGGACGGCAGCCTGTTTTTCGG
CATTGGCGATCGCGGTGAAGGTGAACGCGCCCAGGACCCGCACGACCATGCCGGCTCGGTCCTCCACATCAATGCCGACG
GCAGCATCCCCGCCTCCAACCCGTTTCGTGGCGGTACTGGCGGCCTGGCCGAAATCTGGTCCACCGGACATCGGAACCCC
CAGGGAATTACCTTTGATCCGGAAGATGGCAAGCTCCTCACAGTCGAGCACGGCGCGCGCGGCGGCGACGAAGTGAACAA
TCCGCAGCCTGGCAGAAATTACGGCTGGCCGGTGATCACCTTCGGCAAGGACTATTCCGGTGTGGAGATCGGCGAAGGCA
CGGCGAAGGAAGGCCTGGAGCAGCCGCTCTTTTACTGGGACCCCTCGATCGCGCCGGGTGCGATTGCCGTATACCGCGGC
AGCATGTTTCCAGAGTGGAACGGCGATCTCTTGATCGCAGCACTGAAATACCAGTTGCTTACCCGCCTCGACCGCGACGA
GACCGGCACGGTCACGGCCGAGGAACGTTTGTTCGACGGCGAATTCGGCCGAATCCGCGACGTCATCGTCGCTCCCGACG
GGGCACTCATCATGGTCACCGATGAGGAAGATGGCGAAGTGCTCAGGGTCTCCAAAGCCCCGACACAGTAG

Upstream 100 bases:

>100_bases
CGCTCCAGTTTCAGATCTGCACCCATTCAGGTTTGCCCGCGCCTACGGACCTCCGAGACGAAACGATGCGGTTCCCGCAG
GCAAAGACCGGAGAAAAGCA

Downstream 100 bases:

>100_bases
CACGCATCCGGAAGGCTGCCGGCCGAGGCAACATCGCGCGGCTTGCCCGGAAAAAACGCAACTGGTAGAGCGACCTGCAA
TCACCGGAGCAGTATGGCTT

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MRHRRWTALGSSNIPAILISSMAAAAPFLVNFTAFAALAQEAREFSTQTGTVLVETLASGLEHPWAVEAMPDGALIVTER
PGRLRILRDGKLSDAIKGVPTVAAHGQGGLLDVALDRQFATNRTIYLTLSARGEGGYGTALVRAALSQDGRSLTDAKEIF
RMNRFTRKGQHFGSRIAIDKDGSLFFGIGDRGEGERAQDPHDHAGSVLHINADGSIPASNPFRGGTGGLAEIWSTGHRNP
QGITFDPEDGKLLTVEHGARGGDEVNNPQPGRNYGWPVITFGKDYSGVEIGEGTAKEGLEQPLFYWDPSIAPGAIAVYRG
SMFPEWNGDLLIAALKYQLLTRLDRDETGTVTAEERLFDGEFGRIRDVIVAPDGALIMVTDEEDGEVLRVSKAPTQ

Sequences:

>Translated_396_residues
MRHRRWTALGSSNIPAILISSMAAAAPFLVNFTAFAALAQEAREFSTQTGTVLVETLASGLEHPWAVEAMPDGALIVTER
PGRLRILRDGKLSDAIKGVPTVAAHGQGGLLDVALDRQFATNRTIYLTLSARGEGGYGTALVRAALSQDGRSLTDAKEIF
RMNRFTRKGQHFGSRIAIDKDGSLFFGIGDRGEGERAQDPHDHAGSVLHINADGSIPASNPFRGGTGGLAEIWSTGHRNP
QGITFDPEDGKLLTVEHGARGGDEVNNPQPGRNYGWPVITFGKDYSGVEIGEGTAKEGLEQPLFYWDPSIAPGAIAVYRG
SMFPEWNGDLLIAALKYQLLTRLDRDETGTVTAEERLFDGEFGRIRDVIVAPDGALIMVTDEEDGEVLRVSKAPTQ
>Mature_396_residues
MRHRRWTALGSSNIPAILISSMAAAAPFLVNFTAFAALAQEAREFSTQTGTVLVETLASGLEHPWAVEAMPDGALIVTER
PGRLRILRDGKLSDAIKGVPTVAAHGQGGLLDVALDRQFATNRTIYLTLSARGEGGYGTALVRAALSQDGRSLTDAKEIF
RMNRFTRKGQHFGSRIAIDKDGSLFFGIGDRGEGERAQDPHDHAGSVLHINADGSIPASNPFRGGTGGLAEIWSTGHRNP
QGITFDPEDGKLLTVEHGARGGDEVNNPQPGRNYGWPVITFGKDYSGVEIGEGTAKEGLEQPLFYWDPSIAPGAIAVYRG
SMFPEWNGDLLIAALKYQLLTRLDRDETGTVTAEERLFDGEFGRIRDVIVAPDGALIMVTDEEDGEVLRVSKAPTQ

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=385, Percent_Identity=41.5584415584416, Blast_Score=265, Evalue=6e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42649; Mature: 42649

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHRRWTALGSSNIPAILISSMAAAAPFLVNFTAFAALAQEAREFSTQTGTVLVETLASG
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEHPWAVEAMPDGALIVTERPGRLRILRDGKLSDAIKGVPTVAAHGQGGLLDVALDRQFA
CCCCEEEEECCCCEEEEECCCCEEEEEECCCHHHHHCCCCCEEECCCCCEEEEEECCHHC
TNRTIYLTLSARGEGGYGTALVRAALSQDGRSLTDAKEIFRMNRFTRKGQHFGSRIAIDK
CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
DGSLFFGIGDRGEGERAQDPHDHAGSVLHINADGSIPASNPFRGGTGGLAEIWSTGHRNP
CCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCC
QGITFDPEDGKLLTVEHGARGGDEVNNPQPGRNYGWPVITFGKDYSGVEIGEGTAKEGLE
CCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCHHHHHHC
QPLFYWDPSIAPGAIAVYRGSMFPEWNGDLLIAALKYQLLTRLDRDETGTVTAEERLFDG
CCCEEECCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEHHHHCCCC
EFGRIRDVIVAPDGALIMVTDEEDGEVLRVSKAPTQ
CCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MRHRRWTALGSSNIPAILISSMAAAAPFLVNFTAFAALAQEAREFSTQTGTVLVETLASG
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEHPWAVEAMPDGALIVTERPGRLRILRDGKLSDAIKGVPTVAAHGQGGLLDVALDRQFA
CCCCEEEEECCCCEEEEECCCCEEEEEECCCHHHHHCCCCCEEECCCCCEEEEEECCHHC
TNRTIYLTLSARGEGGYGTALVRAALSQDGRSLTDAKEIFRMNRFTRKGQHFGSRIAIDK
CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
DGSLFFGIGDRGEGERAQDPHDHAGSVLHINADGSIPASNPFRGGTGGLAEIWSTGHRNP
CCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCC
QGITFDPEDGKLLTVEHGARGGDEVNNPQPGRNYGWPVITFGKDYSGVEIGEGTAKEGLE
CCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCHHHHHHC
QPLFYWDPSIAPGAIAVYRGSMFPEWNGDLLIAALKYQLLTRLDRDETGTVTAEERLFDG
CCCEEECCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEHHHHCCCC
EFGRIRDVIVAPDGALIMVTDEEDGEVLRVSKAPTQ
CCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]