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The map label for this gene is ugpB [C]

Identifier: 150397347

GI number: 150397347

Start: 2215395

End: 2216639

Strand: Reverse

Name: ugpB [C]

Synonym: Smed_2146

Alternate gene names: 150397347

Gene position: 2216639-2215395 (Counterclockwise)

Preceding gene: 150397350

Following gene: 150397346

Centisome position: 58.61

GC content: 57.99

Gene sequence:

>1245_bases
ATGCGCAAAAGAAGTATCATGCTAGCTGCACTTATCCTGGCAGCTACATCGTCACTCGCCAAAGCCGAGGAGGTTACCCT
TTGGGTGCGAACTTCGTCGGGCGCGGTGCTTCAGGGGCTTGCGGACAAGTATAACGCCTCACACGACGACAAAGTTGTCG
TCACGCAGATTACGGCCGAGCAGATGGTTCCGAAACTCGGTGCAGCGATCGCCGGTGGTTCGCCACCGGACGGTGCAGTG
CTGGACCTGATTTATCTTCCGACCTTTGCAGCCAGCGACAGCCTGGAGGACGTCACCGATTTCGTCAAAGGACTGCCTTA
TGCGGAGGCACTCAGTCCGTCTCACATCCGTTTGGCGACCTATGAAGACAGAATCTACGGCCTGCCTGCTCTGCCTGACG
CATCCATCATCGCTTATAACACGGAACTCTTCGAAAAGGCTGGCCTCGATCCCAAGAAAGCCCCGGCCTCCCTTGCCGAG
ATCGTCGACTACGCGAAGAAGATACGCGGCATCGGCGAGGATACCTACGGTTTCTATTTCGTCGCGAACTCGGGCAGCTG
GCTGATCTACGATTTTCTGCCTCACATCTGGGCGGCGAACGCGGACGTCCTGACGGATGATGGACGAGAGGCGACCATCG
ATACGCCAGCCATGCGCGAAACGATAGCTGCCTACCGGGACATGTGGAGTGCCGGCGCCGTGCATCCGACGTCCAGATCG
GGCAATGGCAACAATGCAGTCGAGGCCTTCGCCTCCGGCAAGGTCGGAATCCTGATGACGGGTTCGTACATCGTGAACCT
GCTCACCAACAAATATCCTGACGTCAAATTTGATGTTGCACCGATCCCAGGCCCGAGCGGTGGCGTCTCCAGTTTCGCTG
GTGGCGACACTCTTTCTCTGATGAAGGGCATCAGCGAGGAGAAGAAGAAGGTCCTGCTCGACTTCGTCGAGTTCTATATG
CAGCCCGAGCAGCAGGTCTATATCACGAAGGAGTCGGGCATGCCCTCGCGAACCGACCTCGCCGGCGAGGCATATGCGCA
GTTCGACAAGCGCAATCTGGTCGCCTACGACATACTGGCCAACGCCCGCACGCCTTACACCTTCTCGTCCGACGAACTGT
TCGTCAGCCGCACGGGTCCTTTCCTTAACCTCATCCAGGGTTCGATCTTTGGCGATGACGTCGACGGCGCGATCGCCAAG
GCTCAGGATGGGTTCAGCAAGATCCTCGAACGGACCAACCCCTGA

Upstream 100 bases:

>100_bases
CGTTGGGAAACGCAAATTATCGACAATCGCGTAAAACTCACCTAGCGTTCACTTCGCGTCAGCACGGCAATGCGACAGAC
CACCAAAAAAGGGGAACGCC

Downstream 100 bases:

>100_bases
ATCAAGTCGAGGGCGCGCTTCCGGCGCGCCCCGCGCCCCGCGCCCAGCAACAGCTTGGCTGCCGATACGAACTGCCGCAA
GGCGGCCGACATCTCAACTG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRKRSIMLAALILAATSSLAKAEEVTLWVRTSSGAVLQGLADKYNASHDDKVVVTQITAEQMVPKLGAAIAGGSPPDGAV
LDLIYLPTFAASDSLEDVTDFVKGLPYAEALSPSHIRLATYEDRIYGLPALPDASIIAYNTELFEKAGLDPKKAPASLAE
IVDYAKKIRGIGEDTYGFYFVANSGSWLIYDFLPHIWAANADVLTDDGREATIDTPAMRETIAAYRDMWSAGAVHPTSRS
GNGNNAVEAFASGKVGILMTGSYIVNLLTNKYPDVKFDVAPIPGPSGGVSSFAGGDTLSLMKGISEEKKKVLLDFVEFYM
QPEQQVYITKESGMPSRTDLAGEAYAQFDKRNLVAYDILANARTPYTFSSDELFVSRTGPFLNLIQGSIFGDDVDGAIAK
AQDGFSKILERTNP

Sequences:

>Translated_414_residues
MRKRSIMLAALILAATSSLAKAEEVTLWVRTSSGAVLQGLADKYNASHDDKVVVTQITAEQMVPKLGAAIAGGSPPDGAV
LDLIYLPTFAASDSLEDVTDFVKGLPYAEALSPSHIRLATYEDRIYGLPALPDASIIAYNTELFEKAGLDPKKAPASLAE
IVDYAKKIRGIGEDTYGFYFVANSGSWLIYDFLPHIWAANADVLTDDGREATIDTPAMRETIAAYRDMWSAGAVHPTSRS
GNGNNAVEAFASGKVGILMTGSYIVNLLTNKYPDVKFDVAPIPGPSGGVSSFAGGDTLSLMKGISEEKKKVLLDFVEFYM
QPEQQVYITKESGMPSRTDLAGEAYAQFDKRNLVAYDILANARTPYTFSSDELFVSRTGPFLNLIQGSIFGDDVDGAIAK
AQDGFSKILERTNP
>Mature_414_residues
MRKRSIMLAALILAATSSLAKAEEVTLWVRTSSGAVLQGLADKYNASHDDKVVVTQITAEQMVPKLGAAIAGGSPPDGAV
LDLIYLPTFAASDSLEDVTDFVKGLPYAEALSPSHIRLATYEDRIYGLPALPDASIIAYNTELFEKAGLDPKKAPASLAE
IVDYAKKIRGIGEDTYGFYFVANSGSWLIYDFLPHIWAANADVLTDDGREATIDTPAMRETIAAYRDMWSAGAVHPTSRS
GNGNNAVEAFASGKVGILMTGSYIVNLLTNKYPDVKFDVAPIPGPSGGVSSFAGGDTLSLMKGISEEKKKVLLDFVEFYM
QPEQQVYITKESGMPSRTDLAGEAYAQFDKRNLVAYDILANARTPYTFSSDELFVSRTGPFLNLIQGSIFGDDVDGAIAK
AQDGFSKILERTNP

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44574; Mature: 44574

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRSIMLAALILAATSSLAKAEEVTLWVRTSSGAVLQGLADKYNASHDDKVVVTQITAE
CCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECHH
QMVPKLGAAIAGGSPPDGAVLDLIYLPTFAASDSLEDVTDFVKGLPYAEALSPSHIRLAT
HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEEE
YEDRIYGLPALPDASIIAYNTELFEKAGLDPKKAPASLAEIVDYAKKIRGIGEDTYGFYF
ECCCEECCCCCCCCCEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
VANSGSWLIYDFLPHIWAANADVLTDDGREATIDTPAMRETIAAYRDMWSAGAVHPTSRS
EECCCCEEEEHHHHHHHCCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
GNGNNAVEAFASGKVGILMTGSYIVNLLTNKYPDVKFDVAPIPGPSGGVSSFAGGDTLSL
CCCCHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH
MKGISEEKKKVLLDFVEFYMQPEQQVYITKESGMPSRTDLAGEAYAQFDKRNLVAYDILA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEC
NARTPYTFSSDELFVSRTGPFLNLIQGSIFGDDVDGAIAKAQDGFSKILERTNP
CCCCCCEECCCCEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKRSIMLAALILAATSSLAKAEEVTLWVRTSSGAVLQGLADKYNASHDDKVVVTQITAE
CCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECHH
QMVPKLGAAIAGGSPPDGAVLDLIYLPTFAASDSLEDVTDFVKGLPYAEALSPSHIRLAT
HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEEE
YEDRIYGLPALPDASIIAYNTELFEKAGLDPKKAPASLAEIVDYAKKIRGIGEDTYGFYF
ECCCEECCCCCCCCCEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
VANSGSWLIYDFLPHIWAANADVLTDDGREATIDTPAMRETIAAYRDMWSAGAVHPTSRS
EECCCCEEEEHHHHHHHCCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
GNGNNAVEAFASGKVGILMTGSYIVNLLTNKYPDVKFDVAPIPGPSGGVSSFAGGDTLSL
CCCCHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH
MKGISEEKKKVLLDFVEFYMQPEQQVYITKESGMPSRTDLAGEAYAQFDKRNLVAYDILA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEC
NARTPYTFSSDELFVSRTGPFLNLIQGSIFGDDVDGAIAKAQDGFSKILERTNP
CCCCCCEECCCCEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA