| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cysW [C]
Identifier: 150397336
GI number: 150397336
Start: 2202112
End: 2202993
Strand: Direct
Name: cysW [C]
Synonym: Smed_2135
Alternate gene names: 150397336
Gene position: 2202112-2202993 (Clockwise)
Preceding gene: 150397335
Following gene: 150397337
Centisome position: 58.23
GC content: 59.75
Gene sequence:
>882_bases ATGACCACGACAACAGCATCAGCACCTCTGATCAGCAAACGAGCGATCATCGACTGGCTTGGCATCGCGCCCTTCATGAT ATTCGCGCTGATGTTCCTGATCATTCCGACGCTCTATCTGGTTACCGGCGCCTTCCTGACGCCTGCCGGCGAGTTTACCT TCAGGAACATCGCCGACCTCTTCACGCCCTCGATCCTGTCGGCTTACTGGATCTCGATCCGCGTATCTGTTGCCTCGTCG CTCGGCGGCGCCCTCATCGGCTTTTTTCTTGCCTGGGCTATCGTGCTTGGCGGGCTGCCGACCTGGATTCGCTCCGGCCT TCTCACCTTTTCCGGCGTCGCCTCCAATTTCGCAGGCGTTCCGCTCGCTTTCGCCTTTCTCGCAACCCTCGGCCGGACCG GGCTCGTCACGGTGTTTTTGCGAGACTGGTTCGGCTTCAATCTCTACTCGACCGGCTTCAATCTCCTGAGCTTCTTCGGT CTCACCATCACCTACATGTATTTCCAGATTCCGCTGATGGTGCTGATCCTGACGCCGGCGCTCGACGGCATAAAGAAGGA ATGGCGCGAGGCCGCCGAAATCCTGGGCGCTTCCACCTGGCAGTACTGGCGCATGGTGGCGCTGCCGATTCTCTGGCCGA GCCTGCTCGGCACGACGCTCCTGCTTTTCGCCAACGCCTTCGGCGCGATCGCCACCGCCTATGCGCTGACCGGCAGTTCG CTCAACATCGTGCCCATCCTGCTCTACGCGCAGATCCGCGGCGACGTGCTTCACAATCCGAACCTCGGCTATGCGTTGGC CCTCGGCATGATCGTCATTACCGGCATTTCCAATATTCTCTACATCTGGCTGCGAATGCGCGCCGAACGGTGGCAGAAAT GA
Upstream 100 bases:
>100_bases CGTCGTCGGCGCGAGCGTACAGTAGTCGCTACGAGGCCTCCCCGCCCATGAATGGGTGGGGAGGTCATCTTCCTCCGACG CCGGGACGGCCGTAACCTGT
Downstream 100 bases:
>100_bases AAGCACGACGTCTCGGCGCCTGGATCGCCATCGCAATCGGGGCAAGCTATTTCATCGTTCCGCTGCTTGGCACGCTGGAA TTCTCGCTGCGCATGCGCCG
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease; ABC Transporter; ABC Transporter Membrane Spanning Protein; Transmembrane Component Of ABC Transporter; Permease Of ABC Transporter; Polyamine ABC Transporter Permease Protein; ABC Transporter Permease Component; Acriflavin Resistance Protein; Permease; ABC Spermidine/Putrescine Transporter Permease Protein; Sulfate ABC Transporter Permease Protein; ABC-Type Transporter Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Sugar ABC Transporter; ABC Trasnporter Integral Membrane Subunit; Permease Protein; ABC Transporter, Permease Component Fragment; ABC Transport System Membrane Protein; Spermidine/Putrescine ABC Transporter Permease Protein; Sulfate ABC Transporter Permease CysT
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTTTTASAPLISKRAIIDWLGIAPFMIFALMFLIIPTLYLVTGAFLTPAGEFTFRNIADLFTPSILSAYWISIRVSVASS LGGALIGFFLAWAIVLGGLPTWIRSGLLTFSGVASNFAGVPLAFAFLATLGRTGLVTVFLRDWFGFNLYSTGFNLLSFFG LTITYMYFQIPLMVLILTPALDGIKKEWREAAEILGASTWQYWRMVALPILWPSLLGTTLLLFANAFGAIATAYALTGSS LNIVPILLYAQIRGDVLHNPNLGYALALGMIVITGISNILYIWLRMRAERWQK
Sequences:
>Translated_293_residues MTTTTASAPLISKRAIIDWLGIAPFMIFALMFLIIPTLYLVTGAFLTPAGEFTFRNIADLFTPSILSAYWISIRVSVASS LGGALIGFFLAWAIVLGGLPTWIRSGLLTFSGVASNFAGVPLAFAFLATLGRTGLVTVFLRDWFGFNLYSTGFNLLSFFG LTITYMYFQIPLMVLILTPALDGIKKEWREAAEILGASTWQYWRMVALPILWPSLLGTTLLLFANAFGAIATAYALTGSS LNIVPILLYAQIRGDVLHNPNLGYALALGMIVITGISNILYIWLRMRAERWQK >Mature_292_residues TTTTASAPLISKRAIIDWLGIAPFMIFALMFLIIPTLYLVTGAFLTPAGEFTFRNIADLFTPSILSAYWISIRVSVASSL GGALIGFFLAWAIVLGGLPTWIRSGLLTFSGVASNFAGVPLAFAFLATLGRTGLVTVFLRDWFGFNLYSTGFNLLSFFGL TITYMYFQIPLMVLILTPALDGIKKEWREAAEILGASTWQYWRMVALPILWPSLLGTTLLLFANAFGAIATAYALTGSSL NIVPILLYAQIRGDVLHNPNLGYALALGMIVITGISNILYIWLRMRAERWQK
Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG4132
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32188; Mature: 32056
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTASAPLISKRAIIDWLGIAPFMIFALMFLIIPTLYLVTGAFLTPAGEFTFRNIADL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FTPSILSAYWISIRVSVASSLGGALIGFFLAWAIVLGGLPTWIRSGLLTFSGVASNFAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH PLAFAFLATLGRTGLVTVFLRDWFGFNLYSTGFNLLSFFGLTITYMYFQIPLMVLILTPA HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDGIKKEWREAAEILGASTWQYWRMVALPILWPSLLGTTLLLFANAFGAIATAYALTGSS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNIVPILLYAQIRGDVLHNPNLGYALALGMIVITGISNILYIWLRMRAERWQK CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTTTASAPLISKRAIIDWLGIAPFMIFALMFLIIPTLYLVTGAFLTPAGEFTFRNIADL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FTPSILSAYWISIRVSVASSLGGALIGFFLAWAIVLGGLPTWIRSGLLTFSGVASNFAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH PLAFAFLATLGRTGLVTVFLRDWFGFNLYSTGFNLLSFFGLTITYMYFQIPLMVLILTPA HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDGIKKEWREAAEILGASTWQYWRMVALPILWPSLLGTTLLLFANAFGAIATAYALTGSS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNIVPILLYAQIRGDVLHNPNLGYALALGMIVITGISNILYIWLRMRAERWQK CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA