| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ordL [H]
Identifier: 150397327
GI number: 150397327
Start: 2190938
End: 2192227
Strand: Direct
Name: ordL [H]
Synonym: Smed_2126
Alternate gene names: 150397327
Gene position: 2190938-2192227 (Clockwise)
Preceding gene: 150397326
Following gene: 150397334
Centisome position: 57.93
GC content: 64.81
Gene sequence:
>1290_bases ATGGCAACGGAGCGTGCTCTCCCCAATCTCTGGCATGCGACGGCGACGGCCGCTCCGCACACTGCTCCGCTTGCGGATGA CCTGACGGTAGAAGTGGCGATCGTCGGCGGTGGTTTCACGGGTCTTTCGGCGGCGCTGCATCTGGCGGAGGCGGGTGTAC GGGCAGCGGTCATCGAAGCACGCATGATCGGCTTCGGCGGCTCGGGCCGCAATGTCGGCCTCGTCAATGCCGGCATGTGG GTGAAGCCGGACGACCTTGTTGCGACGCTTGGAGCAGCGGCGGGCAACCGGCTTCTGGTCGAACTCGGCGACGGTCCATC GCTCGTCTACGATCTCGTCGCGAAATATGGAATCGAATGCGAGGCCGTGCGCAACGGCACGCTACACATGTCCCTCGGTA CGGAGGGCTTGAAGGAAATTCGTGAGCGCGAGGCTCAATGGAAGAAGCGCGGCGCTCCGGTTGAAGTGCTCCCCGCCGAA AAGGCGCAAGCGCTATCGGGGGCCGAGGGCTTCACCGGCGCGCTGCTCGACCGCCGCGCCGGAACCATACAGCCGCTCGC CTATGCGCGAGGTTTGGCGCGTGCAGCGCTCGCTGCCGGCGCTAAGATCTTTACCGACACCCCCCTCCTTTCGGCGAACC GGCAGGGCAATCACTGGAGACTGCAGACCGGGCGGGGGACAGTCACCGCCCGTCACGTCATTCTCGCGACCAATGCCTAT GGCGGCCTTGTCGCCGATGTCCCGTGGAAGGAGTACCGGCAGGAACTGACGATCCTTCCCTACTTCCAGTTCGCAACCAA TCCGCTGCCCGACAAGGTGGCAGCGCGGATATTGCCCGAACGCCAGGGCGCCTGGGATACGGGCCTTGTGATGACCTCCT TCCGAATGGACAAGCAGAACCGGCTGATCTTCGGCTCGATCGGAAGGCTGGACGCCATGGCGGCAGGCACGCACCGCGCC TTCGCCGGCCGGTCGGTGCGCAAGCTCTTCCCCTATATCGGCGACGTCCGCTTCGAACACTGGTGGGACGGCCGCATCGG CATGACGACGAACAATCTGCCGGTGATGCATGTGCTTGCCGACAATGTCGTTTCGGTCAGCGGCTATAACGGCCGCGGGA TCGCCCCGGGCACCGTCTTCGGCCGGGCGCTCGCCCGCCACGTGACCGGCGACACGTCCGCGATCCCGCTCGCGGAAACA CCGATTACGCCAGATCCGTGGCGGATGCTGAAATCCGTCTTCTACCACGCCGGCGCCCAGGCTAAGCATTTCATCGATAA ACGGTTCTGA
Upstream 100 bases:
>100_bases CGGCGCCGTCATGACATCATGAAACATTGTCATGAAAGACTCTGCGGCGATGGCCTTATCAAGGCGGAGATCCCTGACCT CACCGAAGGAACTGTCCGCG
Downstream 100 bases:
>100_bases ACGGAAACCGTCCGCAACCGATCGTTACGCCGCCCGCGGCAGAGCCGAGCGCAGCCGGGACATCAGGGCGCGGCGCGCGG TCACGGGGAGCAGGTTTTGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MATERALPNLWHATATAAPHTAPLADDLTVEVAIVGGGFTGLSAALHLAEAGVRAAVIEARMIGFGGSGRNVGLVNAGMW VKPDDLVATLGAAAGNRLLVELGDGPSLVYDLVAKYGIECEAVRNGTLHMSLGTEGLKEIREREAQWKKRGAPVEVLPAE KAQALSGAEGFTGALLDRRAGTIQPLAYARGLARAALAAGAKIFTDTPLLSANRQGNHWRLQTGRGTVTARHVILATNAY GGLVADVPWKEYRQELTILPYFQFATNPLPDKVAARILPERQGAWDTGLVMTSFRMDKQNRLIFGSIGRLDAMAAGTHRA FAGRSVRKLFPYIGDVRFEHWWDGRIGMTTNNLPVMHVLADNVVSVSGYNGRGIAPGTVFGRALARHVTGDTSAIPLAET PITPDPWRMLKSVFYHAGAQAKHFIDKRF
Sequences:
>Translated_429_residues MATERALPNLWHATATAAPHTAPLADDLTVEVAIVGGGFTGLSAALHLAEAGVRAAVIEARMIGFGGSGRNVGLVNAGMW VKPDDLVATLGAAAGNRLLVELGDGPSLVYDLVAKYGIECEAVRNGTLHMSLGTEGLKEIREREAQWKKRGAPVEVLPAE KAQALSGAEGFTGALLDRRAGTIQPLAYARGLARAALAAGAKIFTDTPLLSANRQGNHWRLQTGRGTVTARHVILATNAY GGLVADVPWKEYRQELTILPYFQFATNPLPDKVAARILPERQGAWDTGLVMTSFRMDKQNRLIFGSIGRLDAMAAGTHRA FAGRSVRKLFPYIGDVRFEHWWDGRIGMTTNNLPVMHVLADNVVSVSGYNGRGIAPGTVFGRALARHVTGDTSAIPLAET PITPDPWRMLKSVFYHAGAQAKHFIDKRF >Mature_428_residues ATERALPNLWHATATAAPHTAPLADDLTVEVAIVGGGFTGLSAALHLAEAGVRAAVIEARMIGFGGSGRNVGLVNAGMWV KPDDLVATLGAAAGNRLLVELGDGPSLVYDLVAKYGIECEAVRNGTLHMSLGTEGLKEIREREAQWKKRGAPVEVLPAEK AQALSGAEGFTGALLDRRAGTIQPLAYARGLARAALAAGAKIFTDTPLLSANRQGNHWRLQTGRGTVTARHVILATNAYG GLVADVPWKEYRQELTILPYFQFATNPLPDKVAARILPERQGAWDTGLVMTSFRMDKQNRLIFGSIGRLDAMAAGTHRAF AGRSVRKLFPYIGDVRFEHWWDGRIGMTTNNLPVMHVLADNVVSVSGYNGRGIAPGTVFGRALARHVTGDTSAIPLAETP ITPDPWRMLKSVFYHAGAQAKHFIDKRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=424, Percent_Identity=30.4245283018868, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46066; Mature: 45935
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATERALPNLWHATATAAPHTAPLADDLTVEVAIVGGGFTGLSAALHLAEAGVRAAVIEA CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCHHHEEEEE RMIGFGGSGRNVGLVNAGMWVKPDDLVATLGAAAGNRLLVELGDGPSLVYDLVAKYGIEC EEEEECCCCCEEEEEECCCEECCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEE EAVRNGTLHMSLGTEGLKEIREREAQWKKRGAPVEVLPAEKAQALSGAEGFTGALLDRRA EEECCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCHHHHHHCCC GTIQPLAYARGLARAALAAGAKIFTDTPLLSANRQGNHWRLQTGRGTVTARHVILATNAY CCCCHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCEEEEECCCCEEEEEEEEEEECCC GGLVADVPWKEYRQELTILPYFQFATNPLPDKVAARILPERQGAWDTGLVMTSFRMDKQN CCEEECCCHHHHHHHCEEEEEHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCC RLIFGSIGRLDAMAAGTHRAFAGRSVRKLFPYIGDVRFEHWWDGRIGMTTNNLPVMHVLA CEEEECCCCHHHHHCCCHHHHCCCHHHHHHHHHCCCEEEEEECCEECEECCCCCEEEEEC DNVVSVSGYNGRGIAPGTVFGRALARHVTGDTSAIPLAETPITPDPWRMLKSVFYHAGAQ CCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCH AKHFIDKRF HHHHHHCCC >Mature Secondary Structure ATERALPNLWHATATAAPHTAPLADDLTVEVAIVGGGFTGLSAALHLAEAGVRAAVIEA CCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCHHHEEEEE RMIGFGGSGRNVGLVNAGMWVKPDDLVATLGAAAGNRLLVELGDGPSLVYDLVAKYGIEC EEEEECCCCCEEEEEECCCEECCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEE EAVRNGTLHMSLGTEGLKEIREREAQWKKRGAPVEVLPAEKAQALSGAEGFTGALLDRRA EEECCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCHHHHHHCCC GTIQPLAYARGLARAALAAGAKIFTDTPLLSANRQGNHWRLQTGRGTVTARHVILATNAY CCCCHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCEEEEECCCCEEEEEEEEEEECCC GGLVADVPWKEYRQELTILPYFQFATNPLPDKVAARILPERQGAWDTGLVMTSFRMDKQN CCEEECCCHHHHHHHCEEEEEHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCC RLIFGSIGRLDAMAAGTHRAFAGRSVRKLFPYIGDVRFEHWWDGRIGMTTNNLPVMHVLA CEEEECCCCHHHHHCCCHHHHCCCHHHHHHHHHCCCEEEEEECCEECEECCCCCEEEEEC DNVVSVSGYNGRGIAPGTVFGRALARHVTGDTSAIPLAETPITPDPWRMLKSVFYHAGAQ CCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCH AKHFIDKRF HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]