| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397262
Identifier: 150397262
GI number: 150397262
Start: 2112254
End: 2112658
Strand: Direct
Name: 150397262
Synonym: Smed_2061
Alternate gene names: NA
Gene position: 2112254-2112658 (Clockwise)
Preceding gene: 150397256
Following gene: 150397263
Centisome position: 55.85
GC content: 58.77
Gene sequence:
>405_bases ATGCGCATGATTTTCGTCAACCTGCCGGTCAAGGATCTGAAAACGTCCCGGACCTTCTTCTCCGCTCTGGGCTTCACATT CAACGAGCAATTCTCAGACGAGACCGCCGCCTGCATGGTCATCGACGACAATATCTTCACCATGCTTCTGACGGAGCCGA AGTTCAGCAGCTTCATCGTCGGCGAAATCAGCGACACGGCGAAGGGCACCGAAGTCATCACGGCCCTTTCGGCTTCCAGC CGCGCCGAGTGCGACGACATGTTCGACAAGGCGATCGCCGCCGGCGGCAAACCATGGAAGCCGGCAATCGATTACGGCTT CATGTACGGCATCAGCTTCCAGGACCCGGACGGCCACGTCTGGGAGTTCATGTGGATGGACATGGCGGCGCAGCAACAGG CCTGA
Upstream 100 bases:
>100_bases CCATTGAACAGGAAAAATTCCGACAAGGATTGTCGGCATAACGCCCAGGCTTTCGTCCTTGGCTCATCGAAGCGGGATCA ATTTCAAATAGGAGCACCCC
Downstream 100 bases:
>100_bases AGGCGGGCATTCTCCTTGCGATAGCGGAAACCGACCACGAACGATTATCCCCAATATCGGTTTGACGTCGGCCCTTGAGA AGGGCCGACACCTACCCCAC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Glyoxalase; Glyoxalase/Bleomycin Resistance; Lactoylglutathione Lyase-Like Protein; Glyoxalase/Bleomycin Resistance Protein/ Dioxygenase
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRMIFVNLPVKDLKTSRTFFSALGFTFNEQFSDETAACMVIDDNIFTMLLTEPKFSSFIVGEISDTAKGTEVITALSASS RAECDDMFDKAIAAGGKPWKPAIDYGFMYGISFQDPDGHVWEFMWMDMAAQQQA
Sequences:
>Translated_134_residues MRMIFVNLPVKDLKTSRTFFSALGFTFNEQFSDETAACMVIDDNIFTMLLTEPKFSSFIVGEISDTAKGTEVITALSASS RAECDDMFDKAIAAGGKPWKPAIDYGFMYGISFQDPDGHVWEFMWMDMAAQQQA >Mature_134_residues MRMIFVNLPVKDLKTSRTFFSALGFTFNEQFSDETAACMVIDDNIFTMLLTEPKFSSFIVGEISDTAKGTEVITALSASS RAECDDMFDKAIAAGGKPWKPAIDYGFMYGISFQDPDGHVWEFMWMDMAAQQQA
Specific function: Unknown
COG id: COG3607
COG function: function code R; Predicted lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14984; Mature: 14984
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMIFVNLPVKDLKTSRTFFSALGFTFNEQFSDETAACMVIDDNIFTMLLTEPKFSSFIV CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEE GEISDTAKGTEVITALSASSRAECDDMFDKAIAAGGKPWKPAIDYGFMYGISFQDPDGHV ECCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCE WEFMWMDMAAQQQA EHHHHHHHHHHCCC >Mature Secondary Structure MRMIFVNLPVKDLKTSRTFFSALGFTFNEQFSDETAACMVIDDNIFTMLLTEPKFSSFIV CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEE GEISDTAKGTEVITALSASSRAECDDMFDKAIAAGGKPWKPAIDYGFMYGISFQDPDGHV ECCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCE WEFMWMDMAAQQQA EHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA