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The map label for this gene is ygaZ [H]

Identifier: 150397259

GI number: 150397259

Start: 2109259

End: 2109975

Strand: Reverse

Name: ygaZ [H]

Synonym: Smed_2058

Alternate gene names: 150397259

Gene position: 2109975-2109259 (Counterclockwise)

Preceding gene: 150397260

Following gene: 150397258

Centisome position: 55.79

GC content: 60.39

Gene sequence:

>717_bases
ATGATTAGAAGCGATTTCCGGGAAGGGCTGCGCGGCGGCTTTCCAATCATGCTGGCGGCGTCGCCCTTCGGAGCGCTTTT
CGGCGCACTTGCGGTGGATAACGGTTTTTCGATTGCCGATGCGGTCTTCATGAGTGCCACCGTCTATGCGGGTGCAAGCC
AGATGGTCGGCATCGAACTCTTCGGAAGCAATGTGCAGCCCTGGCTGGTGGTGCTTTCCGTCTTCGCGGTCAACTTTCGC
CACGTGCTTTATTCCGCTTCTCTCGCCAAGCACATCCGCCACTTCAGCTTCGGTCAGAAGCTGATTGCCTTCTTCCTGCT
CGTGGATCCGCAATATGCAGAGACCGAACAGCGCGGTGAGCGCGGATTGCCGGTCACCTTCGCCTGGTATGCGGGTTTCG
GCCTCGTAATCTATGTCCCCTGGATCATCAACACGCTGATCGGTGCGATTTTCGGGCAGTTGATCGGCGATCCCAAGGCG
ATCGGCCTCGACGTGCTCCTCCCGATTTACTTTCTGGGACTCGTGATGAGCTTCCGAACACGCGACCGGTTCCTGCCGAT
CGTGGCGGTGAGCGCCGTCGCTTCCGTCGCGGCGATGCATTTCGTCGGCTCTCCCTGGCATGTCAGCATCGGTGCCCTTG
CCGGCATCGTGCTTGCAGCCTGTCTGCCGCCGAAGCGGCCGGCGGTCGAAGTTCACGCCGTGGAACAGGAGGCCTGA

Upstream 100 bases:

>100_bases
CATCAGAGTAATTGAATTGTCGCGATGGGCGGCAGCCCCTATCTGTCCGGCAGGCAATCTGCCGGCGTGCTCGTTGCGAG
CGGCCCCGCGGGAGAATTCC

Downstream 100 bases:

>100_bases
TCCTTGGACGCGCAACATCTCGATCTTCTCTATCTCATCGTCGCGGCGGCGGTCGCCACCTATGTCACGCGCTTCGGCGG
CTATGTCCTGATCACGCAGC

Product: AzlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIRSDFREGLRGGFPIMLAASPFGALFGALAVDNGFSIADAVFMSATVYAGASQMVGIELFGSNVQPWLVVLSVFAVNFR
HVLYSASLAKHIRHFSFGQKLIAFFLLVDPQYAETEQRGERGLPVTFAWYAGFGLVIYVPWIINTLIGAIFGQLIGDPKA
IGLDVLLPIYFLGLVMSFRTRDRFLPIVAVSAVASVAAMHFVGSPWHVSIGALAGIVLAACLPPKRPAVEVHAVEQEA

Sequences:

>Translated_238_residues
MIRSDFREGLRGGFPIMLAASPFGALFGALAVDNGFSIADAVFMSATVYAGASQMVGIELFGSNVQPWLVVLSVFAVNFR
HVLYSASLAKHIRHFSFGQKLIAFFLLVDPQYAETEQRGERGLPVTFAWYAGFGLVIYVPWIINTLIGAIFGQLIGDPKA
IGLDVLLPIYFLGLVMSFRTRDRFLPIVAVSAVASVAAMHFVGSPWHVSIGALAGIVLAACLPPKRPAVEVHAVEQEA
>Mature_238_residues
MIRSDFREGLRGGFPIMLAASPFGALFGALAVDNGFSIADAVFMSATVYAGASQMVGIELFGSNVQPWLVVLSVFAVNFR
HVLYSASLAKHIRHFSFGQKLIAFFLLVDPQYAETEQRGERGLPVTFAWYAGFGLVIYVPWIINTLIGAIFGQLIGDPKA
IGLDVLLPIYFLGLVMSFRTRDRFLPIVAVSAVASVAAMHFVGSPWHVSIGALAGIVLAACLPPKRPAVEVHAVEQEA

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=224, Percent_Identity=29.9107142857143, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25684; Mature: 25684

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSDFREGLRGGFPIMLAASPFGALFGALAVDNGFSIADAVFMSATVYAGASQMVGIEL
CCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEEE
FGSNVQPWLVVLSVFAVNFRHVLYSASLAKHIRHFSFGQKLIAFFLLVDPQYAETEQRGE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RGLPVTFAWYAGFGLVIYVPWIINTLIGAIFGQLIGDPKAIGLDVLLPIYFLGLVMSFRT
CCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RDRFLPIVAVSAVASVAAMHFVGSPWHVSIGALAGIVLAACLPPKRPAVEVHAVEQEA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MIRSDFREGLRGGFPIMLAASPFGALFGALAVDNGFSIADAVFMSATVYAGASQMVGIEL
CCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEEE
FGSNVQPWLVVLSVFAVNFRHVLYSASLAKHIRHFSFGQKLIAFFLLVDPQYAETEQRGE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RGLPVTFAWYAGFGLVIYVPWIINTLIGAIFGQLIGDPKAIGLDVLLPIYFLGLVMSFRT
CCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RDRFLPIVAVSAVASVAAMHFVGSPWHVSIGALAGIVLAACLPPKRPAVEVHAVEQEA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]