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The map label for this gene is xylF [C]

Identifier: 150397242

GI number: 150397242

Start: 2093525

End: 2094469

Strand: Direct

Name: xylF [C]

Synonym: Smed_2041

Alternate gene names: 150397242

Gene position: 2093525-2094469 (Clockwise)

Preceding gene: 150397241

Following gene: 150397243

Centisome position: 55.36

GC content: 58.2

Gene sequence:

>945_bases
GTGCTGAAGAAAGCTATAACATTGCTCTCGGCGGCGGTCATCGCTGCGGGAGCAGGTTTCGTTTCAAGCGCATATGCGCA
AGGCAAAACCTACTACTGGGTCTCGCACGGCTCTCCGGCGGACCCGGTGTGGACCTATTTTCTGGCAGGTGCAAAACAGT
GGGCCGAGGATACCGGCAATACGGTAAACACGTCATTCCAGAACGGTGACGTCCCTGCGCAGCAGGAAGCGATTAGAGCG
GCGATTTCGGCGGGTGCGGCCGGCATCGCAACCACCACGCCCGATCCGGGCAGCCTCAACGAGGTCGTCAAGGAAGCAAA
AGCGGCCGGCATTCCGATCATCAATTTCAACACACCGGACCCGCAGGCCGGCTTCGACGCCTATGTCGGAGGCGACAACA
GAGCTTTCGGAAAGAACTGGGCGCAATATCTCGTCGACAAGAAGCTCGTGAAATCCGGCGATTTCGTCTGGATGCCCGTC
GAAGTTCCCGGCGCGACCTACGGCGTTCAGGAAGAGGAAGGCATTGCCAGCGTCTTCAAGCCGTTGAACATCACCTGGGA
AGTCACCGACGCAACGCTTGACCAGGCGGAAATCATCACCCGCATGTCAGACTACCTGACTGCAAACCGTTCGAAGATCA
AGGCGATCATCGGACTGGGCGACCTCGTCACCGGCAGCATCAAGCGCGTCTTCGACCAGGTCGGCGTAAAACCGGGAGAA
ATTCCCGTGGTCGGCTGGGGCAATTCGATAGACACCACCCAGGAGGTTCTGACGGGCTACGTGAATGCCGCCCAATGGCA
AGACCCGCAGGCGACCAGCTATATGGCACTGTCCATGGCTGCCATGGCATCGAGCAAGATACCGCCAGGTTTCAATATCA
TCACCGGCGCGCTCTACGAAAAGGATACGGCAGAGCTCTACGACAAGATCCTCTCCGGCAAGTAA

Upstream 100 bases:

>100_bases
TCAAAATGAAGCTTTAACTAAGTCATTTTGATGTTGACTGAGGAGGTCAGCGAAAATCAGAGGCCCGTTCAGACGATCGG
GCCATGGGAGGAGAATTCAG

Downstream 100 bases:

>100_bases
GCCTCTCGAGTTCAGTCTGGCTGCGTCACCCGGCTTGTTCCGGGTGGCCAACCCAACCGGTGAGAATCATGCAACAACGT
ACGTTCCTGCAAAGCTTCGT

Product: ABC transporter binding protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLKKAITLLSAAVIAAGAGFVSSAYAQGKTYYWVSHGSPADPVWTYFLAGAKQWAEDTGNTVNTSFQNGDVPAQQEAIRA
AISAGAAGIATTTPDPGSLNEVVKEAKAAGIPIINFNTPDPQAGFDAYVGGDNRAFGKNWAQYLVDKKLVKSGDFVWMPV
EVPGATYGVQEEEGIASVFKPLNITWEVTDATLDQAEIITRMSDYLTANRSKIKAIIGLGDLVTGSIKRVFDQVGVKPGE
IPVVGWGNSIDTTQEVLTGYVNAAQWQDPQATSYMALSMAAMASSKIPPGFNIITGALYEKDTAELYDKILSGK

Sequences:

>Translated_314_residues
MLKKAITLLSAAVIAAGAGFVSSAYAQGKTYYWVSHGSPADPVWTYFLAGAKQWAEDTGNTVNTSFQNGDVPAQQEAIRA
AISAGAAGIATTTPDPGSLNEVVKEAKAAGIPIINFNTPDPQAGFDAYVGGDNRAFGKNWAQYLVDKKLVKSGDFVWMPV
EVPGATYGVQEEEGIASVFKPLNITWEVTDATLDQAEIITRMSDYLTANRSKIKAIIGLGDLVTGSIKRVFDQVGVKPGE
IPVVGWGNSIDTTQEVLTGYVNAAQWQDPQATSYMALSMAAMASSKIPPGFNIITGALYEKDTAELYDKILSGK
>Mature_314_residues
MLKKAITLLSAAVIAAGAGFVSSAYAQGKTYYWVSHGSPADPVWTYFLAGAKQWAEDTGNTVNTSFQNGDVPAQQEAIRA
AISAGAAGIATTTPDPGSLNEVVKEAKAAGIPIINFNTPDPQAGFDAYVGGDNRAFGKNWAQYLVDKKLVKSGDFVWMPV
EVPGATYGVQEEEGIASVFKPLNITWEVTDATLDQAEIITRMSDYLTANRSKIKAIIGLGDLVTGSIKRVFDQVGVKPGE
IPVVGWGNSIDTTQEVLTGYVNAAQWQDPQATSYMALSMAAMASSKIPPGFNIITGALYEKDTAELYDKILSGK

Specific function: Involved In The High-Affinity D-Xylose Membrane Transport System. Binds With High Affinity To Xylose. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33357; Mature: 33357

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKAITLLSAAVIAAGAGFVSSAYAQGKTYYWVSHGSPADPVWTYFLAGAKQWAEDTGN
CHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
TVNTSFQNGDVPAQQEAIRAAISAGAAGIATTTPDPGSLNEVVKEAKAAGIPIINFNTPD
EEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCC
PQAGFDAYVGGDNRAFGKNWAQYLVDKKLVKSGDFVWMPVEVPGATYGVQEEEGIASVFK
CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHC
PLNITWEVTDATLDQAEIITRMSDYLTANRSKIKAIIGLGDLVTGSIKRVFDQVGVKPGE
CCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHEEEEECCHHHHHHHHHHHHHHCCCCCC
IPVVGWGNSIDTTQEVLTGYVNAAQWQDPQATSYMALSMAAMASSKIPPGFNIITGALYE
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
KDTAELYDKILSGK
CHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKAITLLSAAVIAAGAGFVSSAYAQGKTYYWVSHGSPADPVWTYFLAGAKQWAEDTGN
CHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
TVNTSFQNGDVPAQQEAIRAAISAGAAGIATTTPDPGSLNEVVKEAKAAGIPIINFNTPD
EEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCC
PQAGFDAYVGGDNRAFGKNWAQYLVDKKLVKSGDFVWMPVEVPGATYGVQEEEGIASVFK
CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHC
PLNITWEVTDATLDQAEIITRMSDYLTANRSKIKAIIGLGDLVTGSIKRVFDQVGVKPGE
CCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHEEEEECCHHHHHHHHHHHHHHCCCCCC
IPVVGWGNSIDTTQEVLTGYVNAAQWQDPQATSYMALSMAAMASSKIPPGFNIITGALYE
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
KDTAELYDKILSGK
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA