| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397233
Identifier: 150397233
GI number: 150397233
Start: 2080474
End: 2080908
Strand: Direct
Name: 150397233
Synonym: Smed_2032
Alternate gene names: NA
Gene position: 2080474-2080908 (Clockwise)
Preceding gene: 150397230
Following gene: 150397236
Centisome position: 55.01
GC content: 63.45
Gene sequence:
>435_bases ATGTCCGGCCTGCTCGCTTTGATCACCGCGGCGATTTTCTTCGGCGCCGCCATCTACATCAACCTGGCCGAGCAGCCTGC AAGGCTTGCGCTGGACGCAGGCGCGGCCCTCCGGGAATGGGTGCCCGCCTATCGGCGTGGATTCGAGATGCAGGCTTCTC TTGCGATCGTGTCCTGCCTTCTTGGCGCTATGGCCTGGTGGCAGACCGGCAATGCGCTCTGGGCCCTGGGAGCGGCCGTG ATCATCCTCAATTGGCCCTATACTCTGCTCGTCATCATGCCGGTCAACCGACGCCTGGAAACGACCCGTCCGGATCAGGC GAATGCGGAGACGCACGAATTGATCGCCCGCTGGGGCAGGCTTCATGCCGGCCGTAGTGCGCTCGGTGCGGTCGCCACGA TGGTCTATTTCACTGCCGCAGCAAGCGCATTGTGA
Upstream 100 bases:
>100_bases AAGGACAAAACATTCAGCAGATCCAAGTGCTACAGCGACTTTTCTGCGTCTGCTAAGACGCGCGGCGCTGTAGTATGGTC ATGCGGAAAAGGAGAAACGC
Downstream 100 bases:
>100_bases CGATATCGCCAAGCGGCCACTTGGCGGCCACTCAGACTAGATCTTCAGCACTTCGGCCGCCTTCATCTCTTCCTCCAGTT TCCGCTCCTCGTCGGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSGLLALITAAIFFGAAIYINLAEQPARLALDAGAALREWVPAYRRGFEMQASLAIVSCLLGAMAWWQTGNALWALGAAV IILNWPYTLLVIMPVNRRLETTRPDQANAETHELIARWGRLHAGRSALGAVATMVYFTAAASAL
Sequences:
>Translated_144_residues MSGLLALITAAIFFGAAIYINLAEQPARLALDAGAALREWVPAYRRGFEMQASLAIVSCLLGAMAWWQTGNALWALGAAV IILNWPYTLLVIMPVNRRLETTRPDQANAETHELIARWGRLHAGRSALGAVATMVYFTAAASAL >Mature_143_residues SGLLALITAAIFFGAAIYINLAEQPARLALDAGAALREWVPAYRRGFEMQASLAIVSCLLGAMAWWQTGNALWALGAAVI ILNWPYTLLVIMPVNRRLETTRPDQANAETHELIARWGRLHAGRSALGAVATMVYFTAAASAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15539; Mature: 15408
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLLALITAAIFFGAAIYINLAEQPARLALDAGAALREWVPAYRRGFEMQASLAIVSCL CCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH LGAMAWWQTGNALWALGAAVIILNWPYTLLVIMPVNRRLETTRPDQANAETHELIARWGR HHHHHHHHCCCHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH LHAGRSALGAVATMVYFTAAASAL HHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGLLALITAAIFFGAAIYINLAEQPARLALDAGAALREWVPAYRRGFEMQASLAIVSCL CHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH LGAMAWWQTGNALWALGAAVIILNWPYTLLVIMPVNRRLETTRPDQANAETHELIARWGR HHHHHHHHCCCHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH LHAGRSALGAVATMVYFTAAASAL HHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA