| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ilvI [H]
Identifier: 150397209
GI number: 150397209
Start: 2057495
End: 2059273
Strand: Reverse
Name: ilvI [H]
Synonym: Smed_2008
Alternate gene names: 150397209
Gene position: 2059273-2057495 (Counterclockwise)
Preceding gene: 150397212
Following gene: 150397208
Centisome position: 54.45
GC content: 61.21
Gene sequence:
>1779_bases ATGAGCGGAACTGAGAACCAGATGACGGGCGCGGAGATCGTTCTCCAGGCTTTGAAAGACAATGGCGTCGAACACATCTT CGGCTATCCCGGCGGCGCCGTGCTTCCAATCTACGACGAGATTTTCCAGCAGGAGGACATACAGCACATCCTCGTCCGCC ACGAGCAGGGCGCCGGCCACATGGCCGAAGGGTATGCCCGCTCCACCGGCAAGGTCGGCGTCATGCTGGTGACATCCGGC CCGGGGGCGACCAATGCGGTTACCCCGCTGCAGGACGCGCTGATGGACTCCATCCCTCTCGTCTGCATCTCGGGGCAGGT ACCGACATCGCTGATCGGTTCTGACGCCTTCCAGGAGTGCGACACGGTCGGAATTACGCGGCCTTGCACCAAGCACAACT GGCTGGTCAGGGACGTCAACGAACTCGCCCGCGTCATCCACGAAGCTTTCCGCGTCGCCCAGTCGGGCCGCCCCGGACCG GTCGTCGTCGACATTCCGAAGGACATCCAGTTTGCGACCGGTGCCTATACGCCGCCTTCGGCCGTTCCAACGCAGAAGAG CTATCAGCCGAAAACCCAGGGCGACCTGAAGAAGATCGAGGAGGCGGTTGCGCTCATGAAGTCCGCGCGCCAGCCGGTTA TCTATTCGGGCGGCGGCGTCATCAATTCCGGCCCGCAAGCCGCACATTTCCTGCGCGAGCTGGTCGAACTCACCGATTTT CCGATCACGTCGACGCTGATGGGCCTCGGCGCCTATCCTGCCTCCGGCAAGAACTGGCTTGGCATGCTCGGCATGCATGG AACCTATGAAGCCAATCTCGCCATGCACGATTGTGACGTCATGATCTGCATAGGAGCGCGCTTTGACGACCGTATCACCG GCCGGCTCAATGCCTTCTCGCCGAATTCAAAGAAGATCCACATCGATATCGACCCGTCCTCGATCAACAAGAACGTCCGT GTCGACGTTCCGATCATCGGCGACGTCGCCGCAGTCCTCGAGGACATGGTTCGCCTGTGGCGTGCTGCGGCCAAGACCGT CGACCGGACGCGGCTCGAGGATTGGTGGAAATCGATCACCAAGTGGCGCGCGCGCAATTCGCTCGCCTATACGCCGAGTG CCGATGTCATCATGCCGCAATATGCGATCCAGCGGCTTTACGAGCTCACCAAGGACCGCGACACCTACATCACCACCGAA GTGGGACAGCACCAGATGTGGGCGGCGCAGTTCTTCGGATTCGAGGAGCCGAACCGGTGGATGACGTCGGGCGGCCTCGG CACCATGGGCTACGGCTTCCCGGCCGCCGTGGGCGTTCAGGTTGCGCATCCGGATAGCCTCGTCATCGATATCGCGGGCG ACGCCTCGATCCAGATGTGCATCCAGGAAATGTCCTGCGCGGTTCAGTACGGCCTGCCGGTCAAGATCTTCATCCTGAAC AATCAATATATGGGCATGGTCCGGCAGTGGCAGCAACTGCTCCACGGCAACCGACTGTCGCATTCCTATACCGAGGCGAT GCCTGACTTCGTCAAGCTCGCCGAGGCCTATGGCGGCGTTGGCATCCGTTGCGAAAAGCCGGGAGAGCTCGACGAAGCAA TCAAGCAGATGATCGATACTCCGGCTCCGGTCATTTTCGATTGCCGAGTCGCAAATCTCGCCAATTGCTTCCCGATGATC CCCTCGGGCAAGGCGCATAACGAAATGCTGCTCCCCGACGAGGCCACGGACGAGGCGGTTGCCAACGCCATCGACGCCAA GGGCCGCCAGCTCGTTTGA
Upstream 100 bases:
>100_bases GTAGCCACCCATGCGCTGAACGAGGCTCCTGACGGGGCCTTTTTTTATGCCTTCAAACACGTTATTCACCCAAACCTGAA CGAGAGACGGAAGCAGGCCA
Downstream 100 bases:
>100_bases GGACAAGGGTAGGAACAGGATCATGAACGCACATCTTCAGCCTACGGGCTCGGCCTACTTCATCGCCAAGGAAACCGAGC TTGCGGAAACGCACACGCTA
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MSGTENQMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGHMAEGYARSTGKVGVMLVTSG PGATNAVTPLQDALMDSIPLVCISGQVPTSLIGSDAFQECDTVGITRPCTKHNWLVRDVNELARVIHEAFRVAQSGRPGP VVVDIPKDIQFATGAYTPPSAVPTQKSYQPKTQGDLKKIEEAVALMKSARQPVIYSGGGVINSGPQAAHFLRELVELTDF PITSTLMGLGAYPASGKNWLGMLGMHGTYEANLAMHDCDVMICIGARFDDRITGRLNAFSPNSKKIHIDIDPSSINKNVR VDVPIIGDVAAVLEDMVRLWRAAAKTVDRTRLEDWWKSITKWRARNSLAYTPSADVIMPQYAIQRLYELTKDRDTYITTE VGQHQMWAAQFFGFEEPNRWMTSGGLGTMGYGFPAAVGVQVAHPDSLVIDIAGDASIQMCIQEMSCAVQYGLPVKIFILN NQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGIRCEKPGELDEAIKQMIDTPAPVIFDCRVANLANCFPMI PSGKAHNEMLLPDEATDEAVANAIDAKGRQLV
Sequences:
>Translated_592_residues MSGTENQMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGHMAEGYARSTGKVGVMLVTSG PGATNAVTPLQDALMDSIPLVCISGQVPTSLIGSDAFQECDTVGITRPCTKHNWLVRDVNELARVIHEAFRVAQSGRPGP VVVDIPKDIQFATGAYTPPSAVPTQKSYQPKTQGDLKKIEEAVALMKSARQPVIYSGGGVINSGPQAAHFLRELVELTDF PITSTLMGLGAYPASGKNWLGMLGMHGTYEANLAMHDCDVMICIGARFDDRITGRLNAFSPNSKKIHIDIDPSSINKNVR VDVPIIGDVAAVLEDMVRLWRAAAKTVDRTRLEDWWKSITKWRARNSLAYTPSADVIMPQYAIQRLYELTKDRDTYITTE VGQHQMWAAQFFGFEEPNRWMTSGGLGTMGYGFPAAVGVQVAHPDSLVIDIAGDASIQMCIQEMSCAVQYGLPVKIFILN NQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGIRCEKPGELDEAIKQMIDTPAPVIFDCRVANLANCFPMI PSGKAHNEMLLPDEATDEAVANAIDAKGRQLV >Mature_591_residues SGTENQMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGHMAEGYARSTGKVGVMLVTSGP GATNAVTPLQDALMDSIPLVCISGQVPTSLIGSDAFQECDTVGITRPCTKHNWLVRDVNELARVIHEAFRVAQSGRPGPV VVDIPKDIQFATGAYTPPSAVPTQKSYQPKTQGDLKKIEEAVALMKSARQPVIYSGGGVINSGPQAAHFLRELVELTDFP ITSTLMGLGAYPASGKNWLGMLGMHGTYEANLAMHDCDVMICIGARFDDRITGRLNAFSPNSKKIHIDIDPSSINKNVRV DVPIIGDVAAVLEDMVRLWRAAAKTVDRTRLEDWWKSITKWRARNSLAYTPSADVIMPQYAIQRLYELTKDRDTYITTEV GQHQMWAAQFFGFEEPNRWMTSGGLGTMGYGFPAAVGVQVAHPDSLVIDIAGDASIQMCIQEMSCAVQYGLPVKIFILNN QYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGIRCEKPGELDEAIKQMIDTPAPVIFDCRVANLANCFPMIP SGKAHNEMLLPDEATDEAVANAIDAKGRQLV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=573, Percent_Identity=25.6544502617801, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI21361361, Length=569, Percent_Identity=25.3075571177504, Blast_Score=142, Evalue=7e-34, Organism=Escherichia coli, GI87081685, Length=570, Percent_Identity=50.8771929824561, Blast_Score=585, Evalue=1e-168, Organism=Escherichia coli, GI1790104, Length=569, Percent_Identity=41.4762741652021, Blast_Score=450, Evalue=1e-127, Organism=Escherichia coli, GI1786717, Length=570, Percent_Identity=34.7368421052632, Blast_Score=311, Evalue=7e-86, Organism=Escherichia coli, GI1787096, Length=560, Percent_Identity=29.2857142857143, Blast_Score=198, Evalue=7e-52, Organism=Escherichia coli, GI1788716, Length=564, Percent_Identity=27.1276595744681, Blast_Score=158, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17531299, Length=571, Percent_Identity=26.6199649737303, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17531301, Length=571, Percent_Identity=26.6199649737303, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17542570, Length=523, Percent_Identity=27.5334608030593, Blast_Score=135, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6323755, Length=585, Percent_Identity=45.4700854700855, Blast_Score=508, Evalue=1e-145, Organism=Saccharomyces cerevisiae, GI6320816, Length=497, Percent_Identity=25.1509054325956, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI19922626, Length=567, Percent_Identity=25.9259259259259, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64734; Mature: 64603
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTENQMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGH CCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC MAEGYARSTGKVGVMLVTSGPGATNAVTPLQDALMDSIPLVCISGQVPTSLIGSDAFQEC HHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHCCHHHHHH DTVGITRPCTKHNWLVRDVNELARVIHEAFRVAQSGRPGPVVVDIPKDIQFATGAYTPPS HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCC AVPTQKSYQPKTQGDLKKIEEAVALMKSARQPVIYSGGGVINSGPQAAHFLRELVELTDF CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC PITSTLMGLGAYPASGKNWLGMLGMHGTYEANLAMHDCDVMICIGARFDDRITGRLNAFS CHHHHHHHCCCCCCCCCCCEEECCCCCCEECCEEEECCCEEEEECCCCCCCCCCEEECCC PNSKKIHIDIDPSSINKNVRVDVPIIGDVAAVLEDMVRLWRAAAKTVDRTRLEDWWKSIT CCCCEEEEEECHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KWRARNSLAYTPSADVIMPQYAIQRLYELTKDRDTYITTEVGQHQMWAAQFFGFEEPNRW HHHHCCCEEECCCCCEECHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCE MTSGGLGTMGYGFPAAVGVQVAHPDSLVIDIAGDASIQMCIQEMSCAVQYGLPVKIFILN EECCCCCCCCCCCCHHHEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEC NQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGIRCEKPGELDEAIKQMIDT CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCC PAPVIFDCRVANLANCFPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV CCCEEEECCHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGTENQMTGAEIVLQALKDNGVEHIFGYPGGAVLPIYDEIFQQEDIQHILVRHEQGAGH CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC MAEGYARSTGKVGVMLVTSGPGATNAVTPLQDALMDSIPLVCISGQVPTSLIGSDAFQEC HHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHCCHHHHHH DTVGITRPCTKHNWLVRDVNELARVIHEAFRVAQSGRPGPVVVDIPKDIQFATGAYTPPS HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCC AVPTQKSYQPKTQGDLKKIEEAVALMKSARQPVIYSGGGVINSGPQAAHFLRELVELTDF CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC PITSTLMGLGAYPASGKNWLGMLGMHGTYEANLAMHDCDVMICIGARFDDRITGRLNAFS CHHHHHHHCCCCCCCCCCCEEECCCCCCEECCEEEECCCEEEEECCCCCCCCCCEEECCC PNSKKIHIDIDPSSINKNVRVDVPIIGDVAAVLEDMVRLWRAAAKTVDRTRLEDWWKSIT CCCCEEEEEECHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KWRARNSLAYTPSADVIMPQYAIQRLYELTKDRDTYITTEVGQHQMWAAQFFGFEEPNRW HHHHCCCEEECCCCCEECHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCE MTSGGLGTMGYGFPAAVGVQVAHPDSLVIDIAGDASIQMCIQEMSCAVQYGLPVKIFILN EECCCCCCCCCCCCHHHEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEC NQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGIRCEKPGELDEAIKQMIDT CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCC PAPVIFDCRVANLANCFPMIPSGKAHNEMLLPDEATDEAVANAIDAKGRQLV CCCEEEECCHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]