| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is eamB [H]
Identifier: 150397203
GI number: 150397203
Start: 2053427
End: 2054020
Strand: Reverse
Name: eamB [H]
Synonym: Smed_2002
Alternate gene names: 150397203
Gene position: 2054020-2053427 (Counterclockwise)
Preceding gene: 150397205
Following gene: 150397202
Centisome position: 54.31
GC content: 60.77
Gene sequence:
>594_bases ATGCAACCGGATACGCTGCTGGCGCTGTTCCTGTTCGCCTTCACGACGTCGATCACGCCGGGGCCGAACAACATGATGCT GTTTGCCTCGGGCGTGAACTTTGGTTTCGTGCGTACCATTCCTCATATGCTGGGTATCGGCAGCGGCTTCTTCGTTCTCC TCATCGCAGTCGGGCTCGGCCTCGGCGCACTGCTTCATTCCGTGCCGGTCCTCCATACGGCGTTGAAATTTGCCGGGGGC GCCTATCTCGTCTGGATCGCCTGGAAGATCGGCGCGTCGCGCTCGCTCGGCGAGGGAAAGGCGAATGCGGTGCCCATGAC CTTCCTGCAGGCGGCAGCTTTCCAATGGGTCAATCCAAAGGCCTGGGTGATGGCGGTTTCGGCAATGGCGACTTATACGA GCAGCGACGGTTATTTCACGAGCGTGCTTATCGTCGGCCTGGTCTTCGCGCTCGTCAATGTGCCGAGTGTTTCGACATGG GCGGGCTTCGGCTCGGCGCTCCGGCAATGGCTCTCGGAGCCTGCGCGGCTGAAATGGTTCAACATCACCATGGCCGTACT GCTCGTCGTCAGCCTGTGGCCGATGCTCAGGTAA
Upstream 100 bases:
>100_bases GATCAAAGGACAACATGCAGCAGATCAAAGTGCTACAGCGACCTTTGTGCGTCCGATAAGACGCACGGCGCTGTAGGGGT GAAGCGGCCTGGAGGAGACC
Downstream 100 bases:
>100_bases GCCAATGGGCATCTTCAGAAAATGATTCTGCTTCATCGCCCAATGCATTAATAATAGACGCATTTTCGGAAAGGATTACG GAATGTCCGAGCATCGTCAT
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MQPDTLLALFLFAFTTSITPGPNNMMLFASGVNFGFVRTIPHMLGIGSGFFVLLIAVGLGLGALLHSVPVLHTALKFAGG AYLVWIAWKIGASRSLGEGKANAVPMTFLQAAAFQWVNPKAWVMAVSAMATYTSSDGYFTSVLIVGLVFALVNVPSVSTW AGFGSALRQWLSEPARLKWFNITMAVLLVVSLWPMLR
Sequences:
>Translated_197_residues MQPDTLLALFLFAFTTSITPGPNNMMLFASGVNFGFVRTIPHMLGIGSGFFVLLIAVGLGLGALLHSVPVLHTALKFAGG AYLVWIAWKIGASRSLGEGKANAVPMTFLQAAAFQWVNPKAWVMAVSAMATYTSSDGYFTSVLIVGLVFALVNVPSVSTW AGFGSALRQWLSEPARLKWFNITMAVLLVVSLWPMLR >Mature_197_residues MQPDTLLALFLFAFTTSITPGPNNMMLFASGVNFGFVRTIPHMLGIGSGFFVLLIAVGLGLGALLHSVPVLHTALKFAGG AYLVWIAWKIGASRSLGEGKANAVPMTFLQAAAFQWVNPKAWVMAVSAMATYTSSDGYFTSVLIVGLVFALVNVPSVSTW AGFGSALRQWLSEPARLKWFNITMAVLLVVSLWPMLR
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=191, Percent_Identity=30.8900523560209, Blast_Score=78, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21185; Mature: 21185
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDTLLALFLFAFTTSITPGPNNMMLFASGVNFGFVRTIPHMLGIGSGFFVLLIAVGLG CCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH LGALLHSVPVLHTALKFAGGAYLVWIAWKIGASRSLGEGKANAVPMTFLQAAAFQWVNPK HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH AWVMAVSAMATYTSSDGYFTSVLIVGLVFALVNVPSVSTWAGFGSALRQWLSEPARLKWF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHEEHH NITMAVLLVVSLWPMLR HHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPDTLLALFLFAFTTSITPGPNNMMLFASGVNFGFVRTIPHMLGIGSGFFVLLIAVGLG CCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH LGALLHSVPVLHTALKFAGGAYLVWIAWKIGASRSLGEGKANAVPMTFLQAAAFQWVNPK HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH AWVMAVSAMATYTSSDGYFTSVLIVGLVFALVNVPSVSTWAGFGSALRQWLSEPARLKWF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHEEHH NITMAVLLVVSLWPMLR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA