Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150397179

Identifier: 150397179

GI number: 150397179

Start: 2028427

End: 2028576

Strand: Reverse

Name: 150397179

Synonym: Smed_1977

Alternate gene names: NA

Gene position: 2028576-2028427 (Counterclockwise)

Preceding gene: 150397180

Following gene: 150397178

Centisome position: 53.64

GC content: 53.33

Gene sequence:

>150_bases
ATGGAACTGATACGCGAACTCTGGACCTATATGGGCGTCCGAAAGAAGTTCTGGCTCCTGCCGATCTTCATCGTCCTTGG
CGTCTTTGGCGCAATGGTCGTGCTGACACAGGGTACGGCGGTCGCTCCATTCATCTATACCTTGTTCTGA

Upstream 100 bases:

>100_bases
TTGGACAGCGCGCGCGCCGCACGAGCCTGACCCGGCGACGATGCGCAATCAATTTTGACGCAGGGCCAGAGCCAATGCCC
TGTCTGCGGGGAGGACTAGC

Downstream 100 bases:

>100_bases
GCCGCTGCGCCCATGCGTATTCTCGGTATCTCGGCATTTTATCACGACAGCGCGGCAGCGTTGATCGAAGATGGACGCAT
CGTTGCCGCGGCGCAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MELIRELWTYMGVRKKFWLLPIFIVLGVFGAMVVLTQGTAVAPFIYTLF

Sequences:

>Translated_49_residues
MELIRELWTYMGVRKKFWLLPIFIVLGVFGAMVVLTQGTAVAPFIYTLF
>Mature_49_residues
MELIRELWTYMGVRKKFWLLPIFIVLGVFGAMVVLTQGTAVAPFIYTLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5681; Mature: 5681

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIRELWTYMGVRKKFWLLPIFIVLGVFGAMVVLTQGTAVAPFIYTLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MELIRELWTYMGVRKKFWLLPIFIVLGVFGAMVVLTQGTAVAPFIYTLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA