Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is cya3 [H]

Identifier: 150397162

GI number: 150397162

Start: 2011949

End: 2012902

Strand: Reverse

Name: cya3 [H]

Synonym: Smed_1960

Alternate gene names: 150397162

Gene position: 2012902-2011949 (Counterclockwise)

Preceding gene: 150397164

Following gene: 150397161

Centisome position: 53.22

GC content: 64.57

Gene sequence:

>954_bases
ATGTCAAGAACACGCCGTAAGCTGACGACCATCTTCTGTGCCGACGTGCAGGATTATTCGCGCCTGATGGGGAAGGACGA
AGAGGGGACGCTGGCGGCCCTGAAGCGCAGCCGCGATGCCATGGCGCGCCTGATCGAGGCGCATGAGGGTCGGGTTGTCA
ACACCTGGGGCGATGGCCTGATCGCGGAATTTCCGAGCGTCGTGGAAGCGGTGAGGGCGGCAATAGACGTCCAGAACGAA
TTGGCCGGGTTGAATGCCGGGCGCCCGAGCGAAGCGCGAATGGACTATCGCATCGGCATCAATCTCGGTGATGTGATCGC
TGACGGCGATGACCTTTACGGCGACGGCGTCAATATCGCGGCGCGCCTGCAAGGCTCCGCGCCGGCCGGTGGCATAGTGA
TATCCAGCACCGTCTATGACCAGGTCCGCAACAAGCTGGCCGTCGGCTTCGAATTTCTCGGCGCGCTGACGGTCAAGAAT
ATCGATGGCGGCGTTCCGAGTTACGCGGTTCAGATCGGAGCGGCGGAAGGTCCGGGATTGCCGGAAGCCAGCGGCGGCTG
GGGAAGACAGGGCGCCCCTTCCGATCGCGAGAACCTGGCCGCAGACACAGGAGCAGAAGGGGTGCCAGCCGGGGGCTTAT
CAAGGACGGACCGCCGCATTTTCGGTGTCCTCGGCGTGGCGGCGGCTGGGGTCGTCGCCATAAATTTCGCTTCGTGGGAG
GGGGAGTTCTGGGCGAGATGGCCCTTGTTTGCTTTCGCCTTGATCGCCGTGCTTCGCCAGATAAGCGGGTTGACGCAATT
CGACCGCGGGCTTGCCCTGCTCGGGGCCGTCGGATCTGCGGCCGTCGCGGTCAACCTCCTTTCCTGGGAGGGGCGATTCT
GGGCGATCTGGCCCGTGCTCGGAATTGCGGTTGCGGCGGGGATCCGATGGGCGGTGCGCGGCTCCGCCCGGTGA

Upstream 100 bases:

>100_bases
CGCCGCTGCTCCGGCCACCGGCATTGAGATTCACCACGGCCTCGCTATGCTGCCCGCAAGGCGCCGACCTGCCGTCGACT
CCGAGCGAGGGCGAAATCCG

Downstream 100 bases:

>100_bases
GGTCCGGCCGGCATTGGCAGGTGACCGATGCAGCCGCTGTAACCAGAAGTTGACGGGACTCGGCAAGCCGTGCATTCTGC
CCGCGAAAGAAAGCCAGTTC

Product: putative adenylate/guanylate cyclase

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGLIAEFPSVVEAVRAAIDVQNE
LAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIAARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKN
IDGGVPSYAVQIGAAEGPGLPEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE
GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVLGIAVAAGIRWAVRGSAR

Sequences:

>Translated_317_residues
MSRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGLIAEFPSVVEAVRAAIDVQNE
LAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIAARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKN
IDGGVPSYAVQIGAAEGPGLPEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE
GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVLGIAVAAGIRWAVRGSAR
>Mature_316_residues
SRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGLIAEFPSVVEAVRAAIDVQNEL
AGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIAARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKNI
DGGVPSYAVQIGAAEGPGLPEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWEG
EFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVLGIAVAAGIRWAVRGSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 33335; Mature: 33204

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50125 GUANYLATE_CYCLASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGL
CCCHHHHHHHEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH
IAEFPSVVEAVRAAIDVQNELAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHEEECCCCCCCCCCEEE
ARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKNIDGGVPSYAVQIGAAEGPGL
EEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCC
PEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCC
GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVL
CCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEHHHHH
GIAVAAGIRWAVRGSAR
HHHHHHCCCEEECCCCC
>Mature Secondary Structure 
SRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGL
CCHHHHHHHEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH
IAEFPSVVEAVRAAIDVQNELAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHEEECCCCCCCCCCEEE
ARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKNIDGGVPSYAVQIGAAEGPGL
EEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCC
PEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCC
GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVL
CCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEHHHHH
GIAVAAGIRWAVRGSAR
HHHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]